Gene BamMC406_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1805 
Symbol 
ID6176657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2010754 
End bp2011599 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content69% 
IMG OID641681564 
Producthypothetical protein 
Protein accessionYP_001808506 
Protein GI172060854 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0126825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTGA TTGCCTTCGA CTGGCAGCCT GATGCCGCCG CCGGTCCTGT CTTTACCCTC 
ATCGCCAATC GCGACGAATT CTTTCGCCGT ACGAGTGCGC CGCTTTCCTG GTGGGAGGAC
GTGCCGGGCG TGCTGGCCGG CCGCGATCTC GAAGCGGGCG GCACGTGGCT CGGCGTGTCC
CGCGACGGCC GCTTCGCGGC GCTGACCAAT TACCGCGCGC CGTTCGACAT TCGCGCGGGC
GCACCGACCC GCGGCAAGCT CGTATCCGAT TTCCTCGGCG GCCCGCCGGT CGCGCCGCTC
GATTATCTCG GCGCGCTGGC CGAGCATTCG GCCGTGTACA ACGGCTTCAA CCTGCTGGTC
GGCGACTGGA AGCGGCGTGA ACTCGCGTGG TTCTGCAATC GCGCGGCCGA AGGCGAAACC
GCAGTCGCGC CGCCGGTCGC GGTCAGCGCC GGCGTGCATG CGCTGTCGAA CGCGCGGCTC
GATACGCCCT GGCCGAAAGT CGTGCGCAAG CGTGCGGAAC TCGGCACGCT GCTCACCGAC
AATCCGACTC CGTCGCTCGA CGAACTGATC GAGCTGATGC GCGATCCGCG CGTCGCGGAC
GACGACGCGC TGCCGCACAC CGGCATTCCG ATCGAGCGCG AGCGTGCGCT GTCGGCCGCG
TTCATCGAGA CGCCCGAATA CGGTACGCGC GGCACGACCG CGCTGCGGGT GACGATGAAG
GAAGGCGTGC GGTTGACGGT CGACATCAAG GAACGCTGCG ACGACGACGG CTCGCACCGC
ACCGTTCGGC CGGGCACGTT CGAGCGCGCG TTCACGTTCG ACATCGACGC GACGCAGCCG
CGCTGA
 
Protein sequence
MCLIAFDWQP DAAAGPVFTL IANRDEFFRR TSAPLSWWED VPGVLAGRDL EAGGTWLGVS 
RDGRFAALTN YRAPFDIRAG APTRGKLVSD FLGGPPVAPL DYLGALAEHS AVYNGFNLLV
GDWKRRELAW FCNRAAEGET AVAPPVAVSA GVHALSNARL DTPWPKVVRK RAELGTLLTD
NPTPSLDELI ELMRDPRVAD DDALPHTGIP IERERALSAA FIETPEYGTR GTTALRVTMK
EGVRLTVDIK ERCDDDGSHR TVRPGTFERA FTFDIDATQP R