| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1800 |
|---|
| Symbol | |
|---|
| ID | 6177250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2006017 |
|---|
| End bp | 2006799 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641681559 |
|---|
| Product | TatD family hydrolase |
|---|
| Protein accession | YP_001808501 |
|---|
| Protein GI | 172060849 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.907271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTCG ATTCTCACTG CCACATCAAT TTCAAGGGTC TCGCCGACCG CCTGCCGGCC
GTGCTGGAGA ACATGCGCGA GCACGACGTC ACGCACGCGC TGTGCGTGTC GGTCGACTTC
GAGACGCTGC CCGACGTGCT CGCGATCGCG CAGGCGCACG ACAACGTCTA TGCGTCGGTC
GGCGTGCATC CCGATCACGA GGACGCACGC GAGCCGACGC TCGCGGAACT GATCGAGCTG
GCCGCGCACC CGAAGGTCGT CGCGATCGGC GAGACGGGCC TCGACTACTA CCGCCTCGAA
GGCCGCTCGA TCGCCGACAT GGAATGGCAG CGCGAACGCT TTCGCACGCA TATCCGCGCG
GCGACCGCGA CGATGAAGCC GTTGATCATC CATACGCGCG CGTCGTCGGA AGACACGCTG
CGGATCATGG CCGAGGAGCG CGCGGACGTG CCGGGCGGCG TGATGCACTG CTTCACCGAG
CCGTGGCCCG TCGCCGAGCA GGCGCTCGCG CAGAACTTCC ATATCTCGCT GTCGGGCATC
GTCACGTTCA AGAACGCGAC CGACGTGCAG GACGTCGCGC GGCGCGTGCC GCTCGCGCGG
CTGCTGATCG AAACCGACTC GCCGTACCTC GCGCCGGTGC CGTATCGCGG CAAGCCGAAT
GAACCTGCGT ACGTCAGCCA TGTCGGACGT TTTATCGCAT CCGAGCGCGG GATCGCCGTC
GAGGCGCTGG CCGATGCGAC GACGCAGAAC TTTTTCCGGC TGTTCAAGAT CGCCCGCTCA
TGA
|
|---|
| Protein sequence | MFVDSHCHIN FKGLADRLPA VLENMREHDV THALCVSVDF ETLPDVLAIA QAHDNVYASV
GVHPDHEDAR EPTLAELIEL AAHPKVVAIG ETGLDYYRLE GRSIADMEWQ RERFRTHIRA
ATATMKPLII HTRASSEDTL RIMAEERADV PGGVMHCFTE PWPVAEQALA QNFHISLSGI
VTFKNATDVQ DVARRVPLAR LLIETDSPYL APVPYRGKPN EPAYVSHVGR FIASERGIAV
EALADATTQN FFRLFKIARS
|
|---|
| |