Gene BamMC406_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1799 
Symbol 
ID6176901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2005266 
End bp2005976 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID641681558 
Productankyrin 
Protein accessionYP_001808500 
Protein GI172060848 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.912311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGC CGACCACATA CCTGCCCAAG CGCGCCCTCG TCACCGCCGC GCTCGTCGCG 
AGCGGCCTGT TTGCCGTCGC CGGCGCGCAT GCCGAGTCGC TCGACGCGAT CGTCAAGGCG
GTCAAGTTCG ACGACATCGA CGACATCGGC AAGCAGCTGA AGAGCGGCAA GCTCGATCCG
AACACGCTCG CGCCGAACGG CGACCCGATC CTCGTGATCG CCGCGCGCGA GAAATCCGAC
AAGGTCGCCG CCGCGATCGC GACGACGCCG AACGTCGACC TCGAGAAGGA AGACAAGGCC
GGCGAGAACG CGCTGATGCT CGCATCGCTG AACGGTGATG TCGGCCTCGT CAAGCTGCTG
ATCGACAAGG GCGCGGAAGT CAGCAAGAAG GGCTGGGCGC CGCTGCACTA CGCGGCGACC
AACGGCCAGG ACGCGGTCGT GAAGGTCCTG CTCGACCACG ACGCGTATAT CGACACGGCG
TCGCCGAACG GTACGACGCC GCTGATGATG GCCGCCCGCG GCAACCATGC GACGACGGTC
AACCTGCTGC TCGACCAGGG CGCCGATCCG CAGGTGAAGA ACCAGCTCGG CATCACCGCG
CTCGAGTTCG CGAAGCACTA CAAGGCGCCG GACGCGATCG ACATCCTGAG CAAGCGGACG
GTGCGTGTCG GCGCATCGGC GCCGGCCGAT GCCCAAAAGA GTGCAAAATG A
 
Protein sequence
MMKPTTYLPK RALVTAALVA SGLFAVAGAH AESLDAIVKA VKFDDIDDIG KQLKSGKLDP 
NTLAPNGDPI LVIAAREKSD KVAAAIATTP NVDLEKEDKA GENALMLASL NGDVGLVKLL
IDKGAEVSKK GWAPLHYAAT NGQDAVVKVL LDHDAYIDTA SPNGTTPLMM AARGNHATTV
NLLLDQGADP QVKNQLGITA LEFAKHYKAP DAIDILSKRT VRVGASAPAD AQKSAK