Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1799 |
Symbol | |
ID | 6176901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2005266 |
End bp | 2005976 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641681558 |
Product | ankyrin |
Protein accession | YP_001808500 |
Protein GI | 172060848 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.912311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAAGC CGACCACATA CCTGCCCAAG CGCGCCCTCG TCACCGCCGC GCTCGTCGCG AGCGGCCTGT TTGCCGTCGC CGGCGCGCAT GCCGAGTCGC TCGACGCGAT CGTCAAGGCG GTCAAGTTCG ACGACATCGA CGACATCGGC AAGCAGCTGA AGAGCGGCAA GCTCGATCCG AACACGCTCG CGCCGAACGG CGACCCGATC CTCGTGATCG CCGCGCGCGA GAAATCCGAC AAGGTCGCCG CCGCGATCGC GACGACGCCG AACGTCGACC TCGAGAAGGA AGACAAGGCC GGCGAGAACG CGCTGATGCT CGCATCGCTG AACGGTGATG TCGGCCTCGT CAAGCTGCTG ATCGACAAGG GCGCGGAAGT CAGCAAGAAG GGCTGGGCGC CGCTGCACTA CGCGGCGACC AACGGCCAGG ACGCGGTCGT GAAGGTCCTG CTCGACCACG ACGCGTATAT CGACACGGCG TCGCCGAACG GTACGACGCC GCTGATGATG GCCGCCCGCG GCAACCATGC GACGACGGTC AACCTGCTGC TCGACCAGGG CGCCGATCCG CAGGTGAAGA ACCAGCTCGG CATCACCGCG CTCGAGTTCG CGAAGCACTA CAAGGCGCCG GACGCGATCG ACATCCTGAG CAAGCGGACG GTGCGTGTCG GCGCATCGGC GCCGGCCGAT GCCCAAAAGA GTGCAAAATG A
|
Protein sequence | MMKPTTYLPK RALVTAALVA SGLFAVAGAH AESLDAIVKA VKFDDIDDIG KQLKSGKLDP NTLAPNGDPI LVIAAREKSD KVAAAIATTP NVDLEKEDKA GENALMLASL NGDVGLVKLL IDKGAEVSKK GWAPLHYAAT NGQDAVVKVL LDHDAYIDTA SPNGTTPLMM AARGNHATTV NLLLDQGADP QVKNQLGITA LEFAKHYKAP DAIDILSKRT VRVGASAPAD AQKSAK
|
| |