| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1785 |
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| Symbol | |
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| ID | 6177121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1991273 |
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| End bp | 1991914 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641681544 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001808486 |
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| Protein GI | 172060834 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCAAG CCGGACAGGC GGTCGACGAG CGGGCGGAGG ATGACGCGAT CGCGCGCGGT
GAGCGGTTTC GCGCGCTCGT GCTGCCGCAT CTCGACGCCG CGTACAACCT CGCACGCTGG
CTGAGCGGCA ATCCGGGTGA TGCGGACGAC GTCGTCCAGG ACGCGTGCAT GCGCGCGCTG
CGCTTCGTCG ACTCATGCCG CGGCGACAAC GCCCGGCCGT GGCTGCTGAC GATCGTGCGC
CACACCTGGT ACACGGAGTG GCGGCGCCGC ACCCACGCGC ACGAGGTTGC ACTGCCCGAC
ACGCTCGACG ACACGGAGGT GCCCGACGAT TGGCAGCCGG CGCCCGGGGA TCCGCTCGCG
CAGTTGCTGC GCGGCGAGAA CGTGCGGCTC GTGAACGCGG CGCTCGCGAA GCTGCCGCCC
GAATACCGCG AGGTGCTGGT GCTGCGCGAG ATGGAGGATT TGAGCTACCG CGAGATCGCG
GCGATCGCCG ACGTGCCGGT GGGCACGGTG ATGTCGCGGC TCTCGCGCGG CCGGCGCCGG
CTTGCGGCGC TGCTGGACGG CACGCAGGTG CCGCCGTCCG GACCCGCGTC GGGGCGTGCG
TCGGCGAGCG GAACCGCATC GGAGGCGATC GATGGACTGT AA
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| Protein sequence | MGQAGQAVDE RAEDDAIARG ERFRALVLPH LDAAYNLARW LSGNPGDADD VVQDACMRAL
RFVDSCRGDN ARPWLLTIVR HTWYTEWRRR THAHEVALPD TLDDTEVPDD WQPAPGDPLA
QLLRGENVRL VNAALAKLPP EYREVLVLRE MEDLSYREIA AIADVPVGTV MSRLSRGRRR
LAALLDGTQV PPSGPASGRA SASGTASEAI DGL
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