Gene BamMC406_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1766 
Symbol 
ID6176488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1973275 
End bp1973766 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID641681525 
Producthypothetical protein 
Protein accessionYP_001808467 
Protein GI172060815 
COG category[S] Function unknown 
COG ID[COG3737] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.45072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.274512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTG CGGGCCCGCG CCGTCAGGCG TCCCGTGTGC GCCGGCTCGC GAAACCGGCC 
GCCCGGGCCC GTGCGGCCCG TGCCAGACAC TCCCTACGGA AACCGCGGAT TAACGATTTG
AAACTGCACC AGGACACGAG CGGCGCGCTC AACACCGTCA CCGGCTACGG CCCCGATTAT
GTCGACGTCA ACCTCCAACG CCACGAAGGG AGCGTCATCG TACTGCCCGG CGCACCGGTG
CGGGAATGGC CGGTGTCGTC GTTCGACGCA CTCGCGCCCG AGCATTTCGC GATGCTGCTC
GACCCGGCGC CCGAACTCGT GATCTTCGGC AGCGGCGCGC GGCTGCGCTT CCCGCACCCG
CGGCTCGTGG CCGCGCTCAC GGCCAAGCGG ATCGGCGTCG AGACGATGGA TTTCCAGGCC
GCCTGCCGCA CCTACAACAT CCTGATGGCC GAGGGCCGCA AAGTCGCCGC CGCGCTCTTA
ATTGAACGTT AA
 
Protein sequence
MAAAGPRRQA SRVRRLAKPA ARARAARARH SLRKPRINDL KLHQDTSGAL NTVTGYGPDY 
VDVNLQRHEG SVIVLPGAPV REWPVSSFDA LAPEHFAMLL DPAPELVIFG SGARLRFPHP
RLVAALTAKR IGVETMDFQA ACRTYNILMA EGRKVAAALL IER