Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1755 |
Symbol | |
ID | 6177405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1961331 |
End bp | 1961942 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681514 |
Product | hypothetical protein |
Protein accession | YP_001808456 |
Protein GI | 172060804 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.162595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAAAA AGCTGCTGAT GCTGTTCGTC GCGCTGTCGC TGTCGCTTGC CGCCGGCCTC GCCGCGGCCG TCGAAGTCAA CACGGCCGAC CAGGCCGCGC TCGAAGCGGT GAAGGGGCTC GGGCCCGTGA AGTCGAAGGC GATCATCGAC GAACGCACCA AGAACGGCCC GTTCAAGGAC GCGGACGATC TCGCGAACCG CGTGAAGGGT CTCGGCACGA AATCGGTCGG GCATCTCGAG GAAAACGGCC TGACGATTGG CGGCTCGTCG ACGCCGCCGA AGGGCGTGAA GCTGTCGAAG CCAACCGCGA CGACGTCGGC GACCACGTCG GCCACGACGT CGGCAGGCAC CGCCTCGACG CCGACGACCG CGACGACCGG CACGACGGCG ACCGCACCGG CCGCCAGCAC GCCGGAAGCG GCGGCCAAGC CCGCCAAGAG CAAGCGCGCA TCGAAGAAAG AGAAGGCGGC CGCAGCCGCG GCGGCATCCG CCGATGCAGG TGCAGGCGCG AGCGCGCCGG CCGCTGCGTC GTCCACGAAG GCGACCAAGG GTTCGAAGAA GAAGAGCAAG AAGGACAAGG CAGCCTCCGC CGCCGCGGCG TCGGGCGCCT GA
|
Protein sequence | MLKKLLMLFV ALSLSLAAGL AAAVEVNTAD QAALEAVKGL GPVKSKAIID ERTKNGPFKD ADDLANRVKG LGTKSVGHLE ENGLTIGGSS TPPKGVKLSK PTATTSATTS ATTSAGTAST PTTATTGTTA TAPAASTPEA AAKPAKSKRA SKKEKAAAAA AASADAGAGA SAPAAASSTK ATKGSKKKSK KDKAASAAAA SGA
|
| |