| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1749 |
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| Symbol | |
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| ID | 6176495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1954453 |
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| End bp | 1955457 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681508 |
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| Product | transketolase central region |
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| Protein accession | YP_001808450 |
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| Protein GI | 172060798 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.374866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0546828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGGA AGATCACTTA TTCGCAGGCG ATCAACGAGG CGCTCGCGCA GGAAATGGCG
CGCGACGACA GCGTGATCGT GATGGGCGAG GACAATGCAG GCGGCGCGGG TGCGCCGGGC
GAGGACGACG CGTGGGGCGG CGTGCTCGGC GTGACGAAGG GGCTGTTCCA CAAGTTTCCG
GGGCGCGTGC TCGACACGCC GCTGTCGGAG GGTGGCTACA TCGGCGCGGC GGTCGGTGCG
GCCGCGTGCG GGATGCGGCC CGTCGCGGAG TTGATGTTCA TCGATTTCAT GGGTGTGTGC
TTCGACCAGA TCTTCAATCA GGCCGCGAAA TTCCGCTACA TGTTCGGCGG CAAGGCCGTG
ACGCCGGTCG TGATCCGCGC GATGTACGGT GCCGGCCTGC GCGCGGCCGC GCAGCATTCG
CAGATGCTCA CGTCGCTGTT CACGCACATC CCGGGGCTGA AGGTCGTGTG CCCGGCGACG
CCGTATGACG CGAAGGGGCT GCTGATCCAG GCGATCCGCG ACGACGATCC CGTGATCTTC
CTCGAACACA AGCTGCTCTA CACGCGGGAA GGCGACGTGC CTGAGGAATC CTATGCAATT
CCGTTCGGCG AGGCGAACGT CGTGCGCGAA GGCGACGACG CGACGATCGT CACGTACGGC
CGGATGGTGC ATCTCGCGAC CGACGCGGCC GCGAAGCTCG CGAAGGACGG CATCCACGTC
GACGTGATCG ACCTGCGCAC GACGTCGCCG CTCGACGAGG AAACGATCCT CGAAAGCGCG
GCGCGCACCG GCCGCGTGGT GGTCGTCGAC GAGGCGAACC CGCGCTGCTC GATGGCGACC
GACATCGCCG CGCTCGTCGC GCAGCGCGCG TTCCGGACGC TCAAGGCGCC GATCGAGCTC
GTGACCGCGC CGCACACGCC CGCGCCGTTC GCCGGCGTGC TGGAAGACCT GTATATCCCG
TCCGCCGATG CGATCGCGCA GGCGGTACTG AAGACGAGGA GCTGA
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| Protein sequence | MARKITYSQA INEALAQEMA RDDSVIVMGE DNAGGAGAPG EDDAWGGVLG VTKGLFHKFP
GRVLDTPLSE GGYIGAAVGA AACGMRPVAE LMFIDFMGVC FDQIFNQAAK FRYMFGGKAV
TPVVIRAMYG AGLRAAAQHS QMLTSLFTHI PGLKVVCPAT PYDAKGLLIQ AIRDDDPVIF
LEHKLLYTRE GDVPEESYAI PFGEANVVRE GDDATIVTYG RMVHLATDAA AKLAKDGIHV
DVIDLRTTSP LDEETILESA ARTGRVVVVD EANPRCSMAT DIAALVAQRA FRTLKAPIEL
VTAPHTPAPF AGVLEDLYIP SADAIAQAVL KTRS
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