| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1748 |
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| Symbol | |
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| ID | 6176813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1953333 |
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| End bp | 1954448 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681507 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_001808449 |
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| Protein GI | 172060797 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.572248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0590997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATTC ACATGATCAC GATGCCCAAG TGGGGGCTGT CGATGGAGCA GGGGCAGGTC
AACGGCTGGC TGAAGGCAAT CGGCGAGCGC GTCTCGAAGG GCGACGAAGT GCTCGACGTC
GAGACCGACA AGATCTCGTC GGGCGTCGAG TGCGCGTTCG ACGGCACGCT GCGCCGGCAG
GTCGCGCAGG AGGGCGAGAC GCTGCCGGTC GGTGCGCTGC TCGGCGTGGT GGCGGCGGCC
GACGCGAGCG ATGCCGACAT CGATGCGGCG ATTGCCGAAT TCCAGCGCGA TTTCACGCCG
AGCGCGGCCG CGGACGACGC CGGCGGCCCG CAGCCCGAGA AGGCGCAGAT CGGCGGACGC
ACGATCCGGT TCCTGAAGCT CGGAGACGGA ACGGGCACGC CCGCGGTGCT GATCCACGGC
TTCGGCGGCG ACCTGAACAA CTGGCTGTTC AACCATGCGG AACTCGCCGC GCACCGGCCC
GTGTGGGCGC TCGATCTGCC CGGGCACGGC GAGTCGGCCA AGGCGGTCGA CACCGGCAGC
CTCGACGAAC TGGCCGACGC GGTGCTCGCG CTGCTCGACG CGCAGCATAT CGGCCGCGCG
CACCTGATCG GCCATTCGAT GGGCGGCGCG GTCGCGATGG CGGCGGCCGA GCGCGCGCCG
CAACGCGTGG CGTCGCTGAC GCTGATCGCG AGCGCCGGGC TCGGCGCCGA CATCAACCGC
GGCTACATCG ACGGCTTCGT CGCCGGCAAC AGCCGCAATA CGCTGAAGCC GCACCTCGGC
GCGCTGTTCG CGGACCACGC GCTCGTCACG CGGCAACTGG TCGAGGATCT CGTCAAGTAC
AAGCGACTCG AAGGCGTGCA GGCCGCGCTG GAGAAGATCG CGAACGCAGC GTTCGACGGC
GCGGCCCAGC GGCGCGTGTT CCGCGACCGC GTCGCGTCGC TCGCGCCGCG CACGCTCGTG
ATCTGGGGCG AGCGCGACGA GGTGATTCCC GCGCAGCATG CGCAGGGCTT GCCGGACGGC
GTGCAGGCCG AGGTAATCGC CGGCAGCGGC CACATGGTGC AGATGGAGGC GGCTGCCGAC
GTGAACCGCC TGATCGTCGC GTTTCTCGGA GACTGA
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| Protein sequence | MSIHMITMPK WGLSMEQGQV NGWLKAIGER VSKGDEVLDV ETDKISSGVE CAFDGTLRRQ
VAQEGETLPV GALLGVVAAA DASDADIDAA IAEFQRDFTP SAAADDAGGP QPEKAQIGGR
TIRFLKLGDG TGTPAVLIHG FGGDLNNWLF NHAELAAHRP VWALDLPGHG ESAKAVDTGS
LDELADAVLA LLDAQHIGRA HLIGHSMGGA VAMAAAERAP QRVASLTLIA SAGLGADINR
GYIDGFVAGN SRNTLKPHLG ALFADHALVT RQLVEDLVKY KRLEGVQAAL EKIANAAFDG
AAQRRVFRDR VASLAPRTLV IWGERDEVIP AQHAQGLPDG VQAEVIAGSG HMVQMEAAAD
VNRLIVAFLG D
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