Gene BamMC406_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1743 
Symbol 
ID6176567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1947765 
End bp1948595 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content67% 
IMG OID641681502 
Producthypothetical protein 
Protein accessionYP_001808444 
Protein GI172060792 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.335992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.179509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCGA AACTGACCCG CTGGTTCGAC GACCGCCGCC GCGACCGCGC GCTGCGCAGC 
CATCCGATTG CCGATGCGTT GTGGCAGGAC ACCGTGGCGC GCCTGCCGTT TCTCGACGCG
CTGCCGCCTG GCGACCTGGG CCGGTTGCGC GAACTCACGA GCCTGTTCAT CGCGAAGAAG
TCGTTTTCGA CCGCGCACGG GCTCGAGCTG ACCGACGAGA TGATCGTCGC GATCGCCGCG
CAGGCGTGCC TGCCCGTGCT GAATCTGGAT TTGTCGCTGT ACGACGGCTG GGTCGGCGTC
GTCGTGTATC CGGGCGAATT CGTGATCCGC AAGACCGTGC AGGACGAGGA CGGCGTCGTC
CATGAAGTCG AGCAGGACGC GAGCGGCGAA GCGTGGGAAG GCGGCCCGGT GATCCTGTCG
TGGGAGGACG CGCAGATGAC GGACGGCCGC GACGCGTACA ACGTCGTGAT CCACGAGTTC
GCGCACAAGA TCGACATGAT CAACGGCGAG GCCGACGGCT ATCCGCCCCT TTTTCGTCGC
TGGCACGCGC CGCACCTCGA CGCGCAGGCC TGGGCCGACG TGTTCGAGCA TGCGTACGAC
CAGTTCTGCG CACGCGTCGA CGCGGTGCCG GACCGTGCGT GGGCGCGCTT CGAGCGGGAA
TCGCTGATCG ATCCGTATGC GGCCGACCAC CCGTCCGAAT TCTTCGCGGT GTGCAGCGAA
GCGCTGTTCG TGCGGCCGCG GGCGTTCGAG TCCGAATTTC CGGAGCTGTA CCGGCTGCTC
GCGCGCTACT ACCGTCAGGA TCCGGCCCGC ACGGGCGCCC TCGGCGCGTG A
 
Protein sequence
MLSKLTRWFD DRRRDRALRS HPIADALWQD TVARLPFLDA LPPGDLGRLR ELTSLFIAKK 
SFSTAHGLEL TDEMIVAIAA QACLPVLNLD LSLYDGWVGV VVYPGEFVIR KTVQDEDGVV
HEVEQDASGE AWEGGPVILS WEDAQMTDGR DAYNVVIHEF AHKIDMINGE ADGYPPLFRR
WHAPHLDAQA WADVFEHAYD QFCARVDAVP DRAWARFERE SLIDPYAADH PSEFFAVCSE
ALFVRPRAFE SEFPELYRLL ARYYRQDPAR TGALGA