Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1738 |
Symbol | |
ID | 6177273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1940689 |
End bp | 1943130 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641681497 |
Product | DNA polymerase III subunits gamma and tau |
Protein accession | YP_001808439 |
Protein GI | 172060787 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.206235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0482422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTATC AAGTTCTCGC ACGCAAGTGG CGTCCGAAGG ATTTCGCTTC GCTCGTCGGC CAGGAGCACG TCGTCAGGGC GCTCACGCAC GCGCTCGATG GCGGGCGTCT CCATCACGCC TATCTGTTTA CCGGAACCCG CGGCGTCGGC AAGACGACGC TGTCGCGGAT CTTCGCGAAG GCGCTCAACT GTGAAACCGG CGTCACGTCG CAGCCGTGCG GCGTGTGCCG CGCGTGCCGC GAGATCGACG AAGGCCGCTT CGTCGACTAC GTCGAGATGG ACGCGGCGAG CAACCGCGGC GTCGACGAGA TGGCCGCGCT GCTCGAGCGC GCGGTGTACG CGCCCGTCGA TGCGCGCTTC AAGGTCTACA TGATCGACGA AGTGCACATG CTGACGAACC ATGCGTTCAA CGCGATGCTG AAGACGCTCG AGGAGCCGCC GCCGCACGTC AAGTTCATCC TCGCGACGAC CGACCCGCAG AAGATTCCCG TCACCGTGCT GTCGCGCTGC CTGCAGTTCA ACCTGAAGCA GATGCCGGCC GGGCACATCG TGTCGCATCT CGAGCGGATC CTCGGCGAAG AGCAGATTTC GTTCGAACTG CAGGCGCTGC GTCTGCTCGC GCGCGCCGCG CAGGGCAGCA TGCGCGATGC GCTGTCGCTG ACCGACCAGG CGATCGCCTA TTCGGCGAAC GAAGTGACCG AAGCGGCGGT GTCCGGCATG CTCGGCGCGC TCGACCAGAC CTACATGGTG CGGCTGCTCG ATGCGCTCGC GGCCGGCAAC GGCCCGGAGA TCCTCGCGAT CGCCGACGAG ATGTCGCTAC GCAGCCTGTC GTTTTCCACC GCGCTGCAGG ATCTCGCGAG CCTGCTGCAC CGGATCGCAT GGGCGCAGTT CGCGCCGGGC TCGGTGCTCG ACGAATGGCC GGAAGCGGCC GACTTGCGCC GCTTCGCGGA CGCGCTGAGC CCCGAGCAGG TTCAACTGTT CTATCAGATC GCAACGGTCG GACGCGCGGA ACTCGGCCTC GCTCCGGACG AATACGCCGG CTTCACGATG ACGCTGCTGC GGATGCTCGC GTTCGAGCCG GCCGTCGGCG CCGGCAGTGC GCCGGGTGGC CAGCCGGCCG TGCCGCGTGC CGTACCCGCG CCCGCGCCGC GTGCGACCGC CGCTGCTGCT GCGTCGGCTG CGGCGCCCAA GTCGCCAGCG GTACCCGTAG CGGCACCGGC ACCCAAGCCG CCAGCGGCAC CCGCACCGGC AGCCGCCGCG GAGGTCGTAC GCCCGCAGGC TGCCGCTCCG GTCGCGCCCG CCGCGCGTCC GTCGCCGGTC CAGTCCGGTG ATGCGGCGAC TTCGTCGGCC GTGAAGCCTG TCGCGACAGC GGCAGCGGCT GCGAGCGAAG CGCCGGCCGC ACCGCAGCCG GCAGCGAACC CGGCACCTCA GGCGGCACCG GCGAGCGATG CGCCGCCGGC CGTGCGCAAC GAACCTGAAC CGCCGGCTGT CGCCAAGCGC GTCGACGAAC CTGAACCGCC TGCTGCCGCC AAGCGCGTCG CGGAACCTGC AGCGCCTGCC GAACCGGCGC CGCATGCCAC GGCGGCCACG CCAGCAGCCC CTGCCGCGCG CCCGTCGGCC CGCGGTGGCG CAGCTGCCGC ACTCGACGTG CTGCGCAATG CCGGCATGCG CGTGTCATCC GACCGTTCGC GAGGTGACGC CGCGCCGAAG CAGGCCGTGG CCCAGCCGGC CGCCGACAAA CCGGCGCCTT CGCGTCCTGC CGTGCAGGTG CCGACGCCGC GTGCGGCGGC TCGCGCACCG CAGGCAGCCG ACACGCGCCA GGCGCCGCCG CCGTGGGAAG ACATCCCGCC GGACGAATAC GTGCCGCTCA GCGCCGACGA GATGTTCGGC GGGGCGGCCG ACGACGGCTT CGTCCCGGTA TTCGACAGCG GCCCCGACGA CGTGCGCATT GCGCCGAAGC CGGCAGAGGC CCGTCCGTCC GCACCGGTCG ACACGCGTCC GCTGCCGCCC GCGATCGCGC TCGATCCGAT CGGCTTCGAC GGCGAATGGC CGGCGCTGGC CGCACGGTTG CCGCTGAAGG GCGTCGCGTA TCAGCTGGCG TTCAACAGCG AGCTGACGGC CGTCGACGCG ACGACGTTGA AACTGTCCGT GCCGGTGCCG CAGTATGCGG ATGCCGCCCA GGTCGCGAAG CTGAAGGCCG CGCTGGCCGA CGCGCTCGGC AAGCCTGTCG AGGTCGCGGT CGAGGTCGGG CCCGCGCGGC GCACCGCGGC AGCGCTCGAT GCGGCGGCAC GTGCGGCACG CCAGCGCGAG GCCGAGCAGG AGATCCACGG CGATCCGTTC GTCCAGCAGC TCGTCCGTGA TTTCGGCGCG CGCATCGTCG AAGGCTCGGT GCGGCCGCTC GCCGATTCGG CGCCGGATGG CGCGCCGCCG ACGCTGCATT GA
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Protein sequence | MTYQVLARKW RPKDFASLVG QEHVVRALTH ALDGGRLHHA YLFTGTRGVG KTTLSRIFAK ALNCETGVTS QPCGVCRACR EIDEGRFVDY VEMDAASNRG VDEMAALLER AVYAPVDARF KVYMIDEVHM LTNHAFNAML KTLEEPPPHV KFILATTDPQ KIPVTVLSRC LQFNLKQMPA GHIVSHLERI LGEEQISFEL QALRLLARAA QGSMRDALSL TDQAIAYSAN EVTEAAVSGM LGALDQTYMV RLLDALAAGN GPEILAIADE MSLRSLSFST ALQDLASLLH RIAWAQFAPG SVLDEWPEAA DLRRFADALS PEQVQLFYQI ATVGRAELGL APDEYAGFTM TLLRMLAFEP AVGAGSAPGG QPAVPRAVPA PAPRATAAAA ASAAAPKSPA VPVAAPAPKP PAAPAPAAAA EVVRPQAAAP VAPAARPSPV QSGDAATSSA VKPVATAAAA ASEAPAAPQP AANPAPQAAP ASDAPPAVRN EPEPPAVAKR VDEPEPPAAA KRVAEPAAPA EPAPHATAAT PAAPAARPSA RGGAAAALDV LRNAGMRVSS DRSRGDAAPK QAVAQPAADK PAPSRPAVQV PTPRAAARAP QAADTRQAPP PWEDIPPDEY VPLSADEMFG GAADDGFVPV FDSGPDDVRI APKPAEARPS APVDTRPLPP AIALDPIGFD GEWPALAARL PLKGVAYQLA FNSELTAVDA TTLKLSVPVP QYADAAQVAK LKAALADALG KPVEVAVEVG PARRTAAALD AAARAARQRE AEQEIHGDPF VQQLVRDFGA RIVEGSVRPL ADSAPDGAPP TLH
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