| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1735 |
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| Symbol | |
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| ID | 6176699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1938377 |
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| End bp | 1939582 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681494 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001808436 |
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| Protein GI | 172060784 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0615326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA GTCAGGGCCC GCTCGCGGGC GTCAAAGTGC TCGAATTCGG GACGCTGATC
GCGGGGCCGT TCGCGTCGCG CCTCTTGGCC GAATTCGGCG CGGAAGTGAT CAAGATCGAG
GATCCGAACG GCGGCGACCC GCTGCGCAAG TGGCGCAAGC TGCATCCGGA GCAGGGCGGC
ACGTCGCTAT GGTGGTCGGT CCAGGCGCGT AACAAGAAAT CGGTCACCCT CAACCTGAAA
TCCGATGCCG GCAAGGCGAT CGCGCGGCAG CTCGCGCGCG AGGCCGACAT CGTGGTCGAA
AACTTTCGCC CCGGCCTGCT CGAGAAGCTC GGCCTTGGCT ACGACATCCT GTCGGCCGAC
AACCCCGGGC TCGTGATGGT GCGCCTGTCC GGCTACGGGC AGACGGGCCC GTACCGCGAC
CGGCCCGGCT TCGGCGCGAT CGCCGAATCG ATGGGCGGAT TGCGTCACAT CACCGGCTAT
CCGGATCTGC CGCCGCCGCG CATCGGCATC TCGATCGGCG ACTCGATCGC CGCGCTGCAC
GGCGTGATCG GCGCGCTGAT GGCGCTCCAC CATCGCAACG TGAACGGCGG CGCGGGGCAG
GTGGTCGACG TTGCGCTGTA TGAAGCGGTG TTCAACATGA TGGAAAGCGT GGTGCCCGAA
TACGGCGTGT ACGGGATGGT GCGCGAGCGC ACCGGCGCGT CGCTGCCGGG CATCGTGCCG
TCGAACACCT ACGCGTGTCG CGACGGCAGC ATCGTGATCG GCGGCAACAG CGACCCGATC
TTCAAGCGGC TGATGAAGGC GATCGAGCGC GACGACCTCG CGGACGATCC CGCACTCGCA
CGGAACGACG GACGCGTGCC GCGCACGCAG GAAATCGACG ACGCGATCGC CGCGTGGCTC
GCGCCGCGCA CGATCGACGA CGCACTGGCC GTGCTCAACG CGGCCGACGT GCCGGCCGGG
CGTATCTACA GCGCCGCCGA CATGTTCACC GATCCGCAGT TCGTCGCGCG ACAAATGATC
CAGCGCTTCA AGCTGGCCGA CGGCACCGAC ATTCCGCTGC CGAACGTCAC GCCGAAGCTG
TCCGGCACGC CGGGCGAAAC GCGCTGGCTC GGGCCCGAAC TCGGCGAGCA CACGGACGAG
GTGCTGTGCG GCCTCGGCTA CGACGCGCAG GCGATCGCCG CGCTGCGCGA GGCCGGCGCG
ATCTGA
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| Protein sequence | MSTSQGPLAG VKVLEFGTLI AGPFASRLLA EFGAEVIKIE DPNGGDPLRK WRKLHPEQGG
TSLWWSVQAR NKKSVTLNLK SDAGKAIARQ LAREADIVVE NFRPGLLEKL GLGYDILSAD
NPGLVMVRLS GYGQTGPYRD RPGFGAIAES MGGLRHITGY PDLPPPRIGI SIGDSIAALH
GVIGALMALH HRNVNGGAGQ VVDVALYEAV FNMMESVVPE YGVYGMVRER TGASLPGIVP
SNTYACRDGS IVIGGNSDPI FKRLMKAIER DDLADDPALA RNDGRVPRTQ EIDDAIAAWL
APRTIDDALA VLNAADVPAG RIYSAADMFT DPQFVARQMI QRFKLADGTD IPLPNVTPKL
SGTPGETRWL GPELGEHTDE VLCGLGYDAQ AIAALREAGA I
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