| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1730 |
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| Symbol | |
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| ID | 6177269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1933695 |
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| End bp | 1934471 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641681489 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_001808431 |
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| Protein GI | 172060779 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0609431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.140925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCGA TTCTCGTTTT TGACATCGAG ACCATTCCCG ATGTCGACGG CATTCGCCGT
CTGGAAGATC TGCCCGCGAC GCTCGACGAT GCCGCGGTGG CCGAACATGC GTTCGCCGCG
CGCCGCGAGA AGACCGGCGG CGATTTCCTG CCGCATCACC TGCAGCGCAT CGCGGCGATT
TCCTGCGTGT TCCGCGACAA CAACGGTTTC CGTGTGCGCT CGCTGGGTAC GCCCCAGGAC
AACGAGGCGA CGCTGATCCA GTCGTTCTAC CGCGTGATCG AGAAATACAC GCCGCAGCTC
GTGTCGTGGA ACGGCGGCGG CTTCGATCTG CCGGTGCTCC ATTACCGTGC GCTCGTGCAC
GGGATTCCAG CGACGCGCTA CTGGGACCTG GGCGAGGACG ACCGCGAATT CAAGTGGAAC
AACTACATCG CGCGCTATCA CTCGCGGCAT ACCGATCTGA TGGACGTGCT CGCGATGTAT
CAGGCGCGCG CGAACGCGCC GCTCGACGCG CTCGCGAAGC TGTGCGGCTT TCCGGGCAAG
CTGGGGATGG ACGGCAGCCA GGTGTGGCCG GCGTTCCAGG ACGGGCGGAT CGAGGAAATC
CGCAACTACT GCGAAACCGA CGTCGTCAAC ACCTACCTGC TGTATTGCCG GTTCCAGCTG
ATGCGCGGCG GCCTCACGCC GAGCGAATAT GCGGAAGAGA TCCTGCTCGT GAAGAATTCG
CTTGCGCAGG AGCCCGCGTC GCATTGGGCC GAATACCTGG CCGGCTTCGA CGCGTGA
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| Protein sequence | MTPILVFDIE TIPDVDGIRR LEDLPATLDD AAVAEHAFAA RREKTGGDFL PHHLQRIAAI
SCVFRDNNGF RVRSLGTPQD NEATLIQSFY RVIEKYTPQL VSWNGGGFDL PVLHYRALVH
GIPATRYWDL GEDDREFKWN NYIARYHSRH TDLMDVLAMY QARANAPLDA LAKLCGFPGK
LGMDGSQVWP AFQDGRIEEI RNYCETDVVN TYLLYCRFQL MRGGLTPSEY AEEILLVKNS
LAQEPASHWA EYLAGFDA
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