Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1725 |
Symbol | |
ID | 6176927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1928577 |
End bp | 1929716 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641681484 |
Product | radical SAM protein |
Protein accession | YP_001808426 |
Protein GI | 172060774 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.246342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCG AAACTTCCGT CAATCTTCTC GACTTCGATG CCGAGGGTCT TGTCGCGTAC TGCGGCAGCC TCGGCGAGAA GCCGTTCCGC GCCAAGCAGT TGCAGCGCTG GATCCACCAG TACAACGCCG GCGATTTCGA CGGCATGACC GATCTCGCGA AGTCCCTGAG AGAAAAGCTC AAGGGCCGTG CGTCGATCGT GATGCCCGAG ATCGCCAGCG ATCACGTTTC CGCCGACGGC ACGCGCAAGT GGCTGATCGA CGTCGGAAAC GGCAATGCGG TCGAAACCGT GTTCATCCCG GAAGAGACGC GCGGCACGCT GTGCGTGTCG TCGCAGGCCG GGTGTGCGGT CAACTGCCGC TTCTGCTCGA CGGGCAAGCA GGGCTTCTCC CGCAACCTGT CGACAGCCGA AATCATCGGC CAGCTCCGGA TGGCCGAATT TGCGCTGCGT GCGTCTCTCG GTCGCGCGCC CGGTCCGAAC GGCAAGGCCG AACGGGTCGT CACCAACGTG GTGATGATGG GCATGGGCGA GCCGCTCCTG AACTACAACG CGGTCGTGCC CGCGATGCGG CTGATGCTCG ACGATAACGC GTACGGCCTG TCGCGCCGCC GCGTCACGCT GTCGACGTCC GGCGTGGTGC CGATGATGGA CCGCCTCGGC GCCGAATTGC CGGTCGCGCT CGCCGTTTCG CTGCACGCGC CGAACGATGC GCTGCGCGAC GAGCTGGTGC CGCTCAACAA GAAGCATCCG CTTCGGGAGC TCATGGCCGC GTGCCAGCGC TATCTGAAAG TCGCGCCGCG CGACTTCATT ACTTTCGAAT ACTGCATGCT CGACGGCGTC AACGACACCG AAGCGCATGC GCGCGAACTG CTGGCCGTCA CGCGTGACGT TCCGTGCAAG TTCAATCTGA TCCCGTTCAA TCCGTTTCCG GAATCGGGCC TCATCCGCTC GAAGCCGGAG CAGATCAAGC GCTTTGCACA GGTCCTCATC GACGCGGGTG TCGTCACGAC CGTGCGCAAG ACGCGCGGCG ACGACATCGA CGCCGCGTGC GGCCAGCTGG CCGGCGCCGT GAAGGATCGC ACGCGCCTGG CGGAGCGAAC GGGCGCAGCA GCAAAAATCA TCGAAGTTCG GGCAATTTGA
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Protein sequence | MTSETSVNLL DFDAEGLVAY CGSLGEKPFR AKQLQRWIHQ YNAGDFDGMT DLAKSLREKL KGRASIVMPE IASDHVSADG TRKWLIDVGN GNAVETVFIP EETRGTLCVS SQAGCAVNCR FCSTGKQGFS RNLSTAEIIG QLRMAEFALR ASLGRAPGPN GKAERVVTNV VMMGMGEPLL NYNAVVPAMR LMLDDNAYGL SRRRVTLSTS GVVPMMDRLG AELPVALAVS LHAPNDALRD ELVPLNKKHP LRELMAACQR YLKVAPRDFI TFEYCMLDGV NDTEAHAREL LAVTRDVPCK FNLIPFNPFP ESGLIRSKPE QIKRFAQVLI DAGVVTTVRK TRGDDIDAAC GQLAGAVKDR TRLAERTGAA AKIIEVRAI
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