Gene BamMC406_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1725 
Symbol 
ID6176927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1928577 
End bp1929716 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content64% 
IMG OID641681484 
Productradical SAM protein 
Protein accessionYP_001808426 
Protein GI172060774 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.246342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCG AAACTTCCGT CAATCTTCTC GACTTCGATG CCGAGGGTCT TGTCGCGTAC 
TGCGGCAGCC TCGGCGAGAA GCCGTTCCGC GCCAAGCAGT TGCAGCGCTG GATCCACCAG
TACAACGCCG GCGATTTCGA CGGCATGACC GATCTCGCGA AGTCCCTGAG AGAAAAGCTC
AAGGGCCGTG CGTCGATCGT GATGCCCGAG ATCGCCAGCG ATCACGTTTC CGCCGACGGC
ACGCGCAAGT GGCTGATCGA CGTCGGAAAC GGCAATGCGG TCGAAACCGT GTTCATCCCG
GAAGAGACGC GCGGCACGCT GTGCGTGTCG TCGCAGGCCG GGTGTGCGGT CAACTGCCGC
TTCTGCTCGA CGGGCAAGCA GGGCTTCTCC CGCAACCTGT CGACAGCCGA AATCATCGGC
CAGCTCCGGA TGGCCGAATT TGCGCTGCGT GCGTCTCTCG GTCGCGCGCC CGGTCCGAAC
GGCAAGGCCG AACGGGTCGT CACCAACGTG GTGATGATGG GCATGGGCGA GCCGCTCCTG
AACTACAACG CGGTCGTGCC CGCGATGCGG CTGATGCTCG ACGATAACGC GTACGGCCTG
TCGCGCCGCC GCGTCACGCT GTCGACGTCC GGCGTGGTGC CGATGATGGA CCGCCTCGGC
GCCGAATTGC CGGTCGCGCT CGCCGTTTCG CTGCACGCGC CGAACGATGC GCTGCGCGAC
GAGCTGGTGC CGCTCAACAA GAAGCATCCG CTTCGGGAGC TCATGGCCGC GTGCCAGCGC
TATCTGAAAG TCGCGCCGCG CGACTTCATT ACTTTCGAAT ACTGCATGCT CGACGGCGTC
AACGACACCG AAGCGCATGC GCGCGAACTG CTGGCCGTCA CGCGTGACGT TCCGTGCAAG
TTCAATCTGA TCCCGTTCAA TCCGTTTCCG GAATCGGGCC TCATCCGCTC GAAGCCGGAG
CAGATCAAGC GCTTTGCACA GGTCCTCATC GACGCGGGTG TCGTCACGAC CGTGCGCAAG
ACGCGCGGCG ACGACATCGA CGCCGCGTGC GGCCAGCTGG CCGGCGCCGT GAAGGATCGC
ACGCGCCTGG CGGAGCGAAC GGGCGCAGCA GCAAAAATCA TCGAAGTTCG GGCAATTTGA
 
Protein sequence
MTSETSVNLL DFDAEGLVAY CGSLGEKPFR AKQLQRWIHQ YNAGDFDGMT DLAKSLREKL 
KGRASIVMPE IASDHVSADG TRKWLIDVGN GNAVETVFIP EETRGTLCVS SQAGCAVNCR
FCSTGKQGFS RNLSTAEIIG QLRMAEFALR ASLGRAPGPN GKAERVVTNV VMMGMGEPLL
NYNAVVPAMR LMLDDNAYGL SRRRVTLSTS GVVPMMDRLG AELPVALAVS LHAPNDALRD
ELVPLNKKHP LRELMAACQR YLKVAPRDFI TFEYCMLDGV NDTEAHAREL LAVTRDVPCK
FNLIPFNPFP ESGLIRSKPE QIKRFAQVLI DAGVVTTVRK TRGDDIDAAC GQLAGAVKDR
TRLAERTGAA AKIIEVRAI