Gene BamMC406_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1721 
Symbol 
ID6177055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1923927 
End bp1924556 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID641681480 
Producthypothetical protein 
Protein accessionYP_001808422 
Protein GI172060770 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.814935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.434202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC ACGACGAACA AGAATCGATT GAAAGTGTCA AGGCGTGGTG GGCCCGCTGG 
GGCAACCTCA CCACGTGGAT CGTGCTCGCG GCGCTGGTCG TCGCGGCCGG TTTCAACGGC
TGGAATTACT GGCAGCGCCG TCAGGCCGCG GAGGCTTCCG GGTTGTACGA GCAGGTCCAG
AAGGCCGCCG CCGCGAATGA CAAGGCGACG ATGGCCCGCG CGGCCGCCGA CATGGAAGAC
AAGTTCGCCC GCACGCCGTA TGCGCAGATG ACGGCCCTGT CGGCCGCGAA GACGCTCTAC
GCGGCAGGCG ACGCCGCCGG CGCGAAGGCC CAGCTGCAAT GGGCTGTCGA TCACGCCAGG
GATGACGAGT ACAAGCAGAT CGCGAAGCTG CGTCTCGCGT CGCTGCTGCT CGACGAGAAG
GCGTACGATG CAGGCCTCGC GCTGTTGTCC GGCACGCCGG TCGATGCATT CAAGGGCGTC
GTGGCCGATC GCCGCGGCGA TCTGCTGGCC GCGCAAGGCA AGACCGACGA CGCGCGCGCT
GCGTACAAGC TCGCGCTCGA CGGTCTGCCG CAGGACGACC AGTCTGCGCG CCAGCTCGTG
CAGTTCAAGC TCGACGCGCT CGGCGGTTGA
 
Protein sequence
MSYHDEQESI ESVKAWWARW GNLTTWIVLA ALVVAAGFNG WNYWQRRQAA EASGLYEQVQ 
KAAAANDKAT MARAAADMED KFARTPYAQM TALSAAKTLY AAGDAAGAKA QLQWAVDHAR
DDEYKQIAKL RLASLLLDEK AYDAGLALLS GTPVDAFKGV VADRRGDLLA AQGKTDDARA
AYKLALDGLP QDDQSARQLV QFKLDALGG