Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1717 |
Symbol | |
ID | 6177198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1919511 |
End bp | 1920701 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681476 |
Product | GTP-binding proten HflX |
Protein accession | YP_001808418 |
Protein GI | 172060766 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.658318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.277641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACACCCG ATAATTTGAT CAACGCAGCG CTCGTCGGCA TCGACTTCGG CAAGACCGAT TTCGAAGCCA GTCTCGAAGA ACTCAGTCTT CTCGCCTCCA GTGCGGGGGC CCGTTCCGCC GTCACCCTCA CGGGTCGTCG CGCGAGTCCC GATGCCAAGA TGTTCATCGG CAGCGGCAAA GCCGACGAAC TCCGGCTCGC CTGCGACGCA CACAACGTCG AAATCGTCAT CTTCAACCAC GCCCTGGCAC CGGCCCAGCA ACGCAACCTG GAGCAGGCGC TTAACAGGCG GGTGGTCGAT CGCACGAGCC TCATCCTCGA TATCTTCGCG CAGCGCGCCC GCAGCCACGA AGGCAAGCTG CAGGTCGAGC TCGCGCAGCT GCAATACCTG TCGACCCGCC TGATTCGCGC ATGGACCCAC CTGGAGCGGC AAAAGGGCGG TATCGGCCTG CGCGGCCCCG GCGAAACCCA GCTCGAAACC GACCGCCGGC TGATCGGCGA GCGCATCAAG ATGCTGAAGT CGCGGCTCGA CCGGCTGCGC CGGCAACACA GCACGCAGCG TCGCCAGCGC GCGCGCAGCG GCACGATGTC GGTGTCGCTC GTCGGCTATA CGAACGCGGG CAAGTCGACG CTGTTCAACG CGCTGACGAA GGCGCAGGCC TATGCGGCCG ACCAGCTGTT CGCCACGCTC GATACGACGT CGCGGCGCGT GTACCTGGGC GACGAGGTCG GCCAGATCGT CGTGTCCGAT ACGGTCGGGT TCATCCGCGA ACTGCCTCAC CAGCTGGTTG CCGCGTTTCG CGCGACCCTC GAGGAAACGA TCCATGCGGA TTTGCTGCTG CACGTGGTCG ACGCGTCGAG CGCGGTGCGG CTCGAACAGA TCGAGCAGGT GAACGGCGTG CTGCACGAAA TCGGCGCGGA CACGATCCGA CAGGTGCTGG TGTTCAACAA GATCGACGCC GTGCCCGAGC TGGCGGCCCG CGGCGACGCG GTCGAGCGAG ACGAGTATGG TAATATTTCG CGCGTCTTTT TGAGCGCGCG CACCGGTCAG GGTCTCGACA CGTTGCGTGC CGCTATCGCC GAAATCGCCT CCGCGGAACA CCTTTCCGGC GCGACGTTAC CCAACGGCGC GCTCGACGGC GCTCCCGCAG AACCACACGA AGACCACACG ATTTCCGAAC ACGGGCGCTA A
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Protein sequence | MTPDNLINAA LVGIDFGKTD FEASLEELSL LASSAGARSA VTLTGRRASP DAKMFIGSGK ADELRLACDA HNVEIVIFNH ALAPAQQRNL EQALNRRVVD RTSLILDIFA QRARSHEGKL QVELAQLQYL STRLIRAWTH LERQKGGIGL RGPGETQLET DRRLIGERIK MLKSRLDRLR RQHSTQRRQR ARSGTMSVSL VGYTNAGKST LFNALTKAQA YAADQLFATL DTTSRRVYLG DEVGQIVVSD TVGFIRELPH QLVAAFRATL EETIHADLLL HVVDASSAVR LEQIEQVNGV LHEIGADTIR QVLVFNKIDA VPELAARGDA VERDEYGNIS RVFLSARTGQ GLDTLRAAIA EIASAEHLSG ATLPNGALDG APAEPHEDHT ISEHGR
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