| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1716 |
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| Symbol | |
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| ID | 6177228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1918102 |
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| End bp | 1919427 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681475 |
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| Product | HflK protein |
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| Protein accession | YP_001808417 |
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| Protein GI | 172060765 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.40222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.183963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCT TGCTGTCGAT CAACGATCCC CGCTGGGGAC GCGGCGAAGG CAAGGGCAAC
GACGCATCCC GTCCGCGTGC GAACGAATCG AAGCGTCCGC CCGGTGGCGA CGGTGACGGT
CCGCCCGATC TCGACGAGAT GTGGCGCAAC TTCAACCGGC GTCTGAGCGG CCTGTTCGGC
GGCAAGGGCG GCAACGGCTT CCGGCCCGAC AACGGCCGGG CCGCGCGCGT CGGCGTCGGT
ATCGTGATCG GCGTGCTGGT CGCGGTCTAC GCGGGCAGCG GGCTGTTCGT CGTGCAGGAC
GGCCAGACGG GCGTCGTGCT GCAGTTCGGC AAATTGTCCG GCACGGTCGG CCAGGGCGTG
CACTGGCGCG CGCCGTATCC GTTCGCGTCG CACGAGATCG TCGACACGTC GCAGGTCCGT
TCGATCGAGA TCGGCCGCAA CAACGTCGTG CGTCTCGCGA ACGTGAAGGA AGCCGCGATG
CTGACGCGCG ACGCCGACAT CGTCGACGTG CGTTTCGTCG TCCAGTACCG GATCCGTTCG
GCAACCGATT ACCTGTTCCG CAGCGTCGAC CCCGAGCGCG GCGTGTCGGA GGCCGCGCAG
GCCGCGGTGC GCGCGATCGT CGGCACGCGC AGCGCGGCCG ACATGCTGAA CCAGGACCGC
GACGCGCTGC GCGAGCAGCT GTCCGCCGCG ATCCAGCGCG ATCTCGATCG CTACCAGTCG
GGGCTCGAGG TCACGGCCGT CACGATGCAG AGCGTCGCGG CGCCGGAGCA GACGCAAGCC
GCGTACGCCG AAGTCGCGAA GGCGCGCGAC GAGCGCGAGG CCGCCAAGCG TACCGCGCAG
GCCTATGCGA ACGACCTGCT GCCCAAGGCG CAGGGCAATG CCGCGAAACT CGTCGACGAA
GCGAAGGCGT ATGCCGATCG CGTGGTCACC GAGGCCGAAG GCGACGCCGA CCGCTTCAAG
CAGGTCTATG CGCAGTATTC GAAGGCGCCC GCGGTGATTC GCGAGCGGAT GTACCTCGAG
ACGATGCAGG AAATCTATTC GAACGCGACG AAGGTGTTCG TCGGCAACAA GGGCAGCAAC
GTCGTGTACC TGCCGCTCGA CAAGCTCGTC GAGCAGGGGC GGCAAAACGC CGCGAGCGCG
GCGAATGCCG CGACGCCTGC CGGCGCATCC GCGCCTGACG CAGCGTCGGC GCCGGCGGCC
GCGGCGGCGA GCGTGCCCGC GAGCGCGGCC TCGGCTTCGG CCGCGGCGGC GCCCGCACCG
GGCAGCGACG TGCTGCGGTC GCGCGAAGCG TTCCGCAGCC GCTCGCGCGA AGACGATACG
AAGTAA
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| Protein sequence | MRALLSINDP RWGRGEGKGN DASRPRANES KRPPGGDGDG PPDLDEMWRN FNRRLSGLFG
GKGGNGFRPD NGRAARVGVG IVIGVLVAVY AGSGLFVVQD GQTGVVLQFG KLSGTVGQGV
HWRAPYPFAS HEIVDTSQVR SIEIGRNNVV RLANVKEAAM LTRDADIVDV RFVVQYRIRS
ATDYLFRSVD PERGVSEAAQ AAVRAIVGTR SAADMLNQDR DALREQLSAA IQRDLDRYQS
GLEVTAVTMQ SVAAPEQTQA AYAEVAKARD EREAAKRTAQ AYANDLLPKA QGNAAKLVDE
AKAYADRVVT EAEGDADRFK QVYAQYSKAP AVIRERMYLE TMQEIYSNAT KVFVGNKGSN
VVYLPLDKLV EQGRQNAASA ANAATPAGAS APDAASAPAA AAASVPASAA SASAAAAPAP
GSDVLRSREA FRSRSREDDT K
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