Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1715 |
Symbol | |
ID | 6177242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1917188 |
End bp | 1918087 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641681474 |
Product | HflC protein |
Protein accession | YP_001808416 |
Protein GI | 172060764 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.90323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.244778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAA TCATTGCGCT CGTCGTCGCA ATCGTGATCG TCGCCTTCGC GGCATCGTCG ACCGTGCTGA CCGTCGATCC GCGCCACACG GCCGTGCTGT CGGGCCGCGA CGGCACGCAG CCCGAACTCG CGGGCCCCGG CATCCATTTC AAGCTGCCGC CGCCGCTGCA GACGGCGACG CTGATCGACA CGCGCCTGCA ATCGCTCGAA TCGCCGGATC CGCTGCAACT CGCGACCGAA GACAAGCACG ATCTGCTCGT CACGTATGCG GTCAAGTACC GGATCAGCGA TCCGATGAAG TACTTCACGG CGACGAGCGG CGACTCGGCC ACCGCCGCCG AGCGTCTGGC CGGCGCGCTG AAGAGCGCGC TCGGTGACGC ATTCGGCAAG CGCGTGCTCG ACGACGCGCT CGGCGGACAG CGCGACATCG CCAATGCGGC TCGCGATGCG GTGCGCGCGC AGGCATCCGG CTTCGGCGTC GACGTGGTCG ATGTGCAGTT GACGCGCGTC GACTTGCCGG CCGCGCAGGC CGACGCCGTC TATCAGCGGA TGATTGCCGC GCTGCGCGCG CAGGCCGCAC AGGTGCGCGC GGATGGCGCT GCGGATGTCG AACAGATCAA GGCCGATGCG GAGCGCGAAC AGCAGGCGGT GCTCGCGAAT GCGTACAAGT CCGCGCAGAC GATCAAGGGC GAGGGCGATG CGAAGGCCGC GTCGATCGCC GCCGACGCGT TCGGCCAAGA TCCGCAGTTC TACCAGTTCT ACGCGAGCCT GCAGGCTTAC CGGAATACCT TCAAGCGCAA CGACATCATC GTGGTCGATC CCGACAGCGA GTTTTTCCGT TTCATGCGCA GCCCGACGGG CGGTGCCGCA CCGGCGGCAC CTGCTCCCCG CAAACACTGA
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Protein sequence | MNRIIALVVA IVIVAFAASS TVLTVDPRHT AVLSGRDGTQ PELAGPGIHF KLPPPLQTAT LIDTRLQSLE SPDPLQLATE DKHDLLVTYA VKYRISDPMK YFTATSGDSA TAAERLAGAL KSALGDAFGK RVLDDALGGQ RDIANAARDA VRAQASGFGV DVVDVQLTRV DLPAAQADAV YQRMIAALRA QAAQVRADGA ADVEQIKADA EREQQAVLAN AYKSAQTIKG EGDAKAASIA ADAFGQDPQF YQFYASLQAY RNTFKRNDII VVDPDSEFFR FMRSPTGGAA PAAPAPRKH
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