| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1708 |
|---|
| Symbol | |
|---|
| ID | 6175977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1908102 |
|---|
| End bp | 1908854 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641681467 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001808409 |
|---|
| Protein GI | 172060757 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.383188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCA GCTTTCCTAC GACGTTGCCA ACTTCCCGCA TTTCTCTCGT CGCGCTCGGC
GCAGCGCTTG CCGCGGCTTT GTCCGCCGGG TCCACCGTCG CGTACGCACA GGCATCGGGC
GCAAGCGCGC CTGACGCCGC TGCCGCCGTG CCCGTCGCAG CCTCCGCCAC GCAGGATTTT
GACGCCCGTC AAAAAGTGCT CAATCAACGT TCCGCGGAAA ACGATTATCG TTATGCGGTG
GCGGAGCACG ATTGCTACAG CAAGTTCTTC GTCAATCACT GTCTCGGCAA TGCGCGCGAC
CGGATGCGCG AGGAGCGGGC GAGCATCCGC CAGGAGCAGC TCGCGCTCGA CGACGAGCAG
CGTGCGGTGC GGGCGCAGCA GCGCGACCAG CAGCAGGCGC TGAAGCAGGC GCAGAATGCG
GCGGAAGCGC CGCAGCGCGC GGCGAACGAT GCGGCCAACG CGGCTGCGTT CCGCGACAAG
CAGGAGCAGA ATGCACTGAA GCGGGCGCAG CGCGGCGCGG AAGGGCCGCA GCACGCCGCG
AGCAAGCAGG CCTACGACCA GAAGCAGGCC GACTTCCAGC GCAAGCTCGA CCAGGCGCAC
CAGCAGGCCG CGCAGAAGGC GCAGGAGCGG GCGGACAACG CCACGCGCTA CGAGCAGAAG
CAGAAGGAAG CCGCGCAGCA CAAGGCCGAT GTCGAGCGGC GTCAGCAGGA AGCGGCCCAA
AAGGCCAAGC AGCAGCAACA GCAGGGGCAG TAA
|
|---|
| Protein sequence | MSRSFPTTLP TSRISLVALG AALAAALSAG STVAYAQASG ASAPDAAAAV PVAASATQDF
DARQKVLNQR SAENDYRYAV AEHDCYSKFF VNHCLGNARD RMREERASIR QEQLALDDEQ
RAVRAQQRDQ QQALKQAQNA AEAPQRAAND AANAAAFRDK QEQNALKRAQ RGAEGPQHAA
SKQAYDQKQA DFQRKLDQAH QQAAQKAQER ADNATRYEQK QKEAAQHKAD VERRQQEAAQ
KAKQQQQQGQ
|
|---|
| |