Gene BamMC406_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1703 
Symbol 
ID6177177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1902497 
End bp1903336 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content73% 
IMG OID641681462 
Producthypothetical protein 
Protein accessionYP_001808404 
Protein GI172060752 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.518116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC TGGCGCCGTT GACGTGGCAG GACTGCGTAC AGCCCGACTG GCAGGTGTCA 
CCACGCGTTC GCGCGCTGAT CACGACGCGC GACGGCGGTG TGAGCGAAGG TTCTTACGGG
CGCTGGCGGG ACGGCGCCGA GTTGCCGGGC GGGATGAATC TCGGCTTGCA TACCGGTGAC
GATCCGGCCC ATGTCGGCGC GAATCGCGCG CGCTTGCTCG CACTGGCGGG CCAGTCGCGC
GCGGCGTGGC TCGAGCAGGT TCACGGCGCG CGGATCGTGC GCGCGGACGA GGTGATCGAC
GCCGCGCCGG GCGCCGCGGT GCCCGTGCAA GCCGACGCGA GCGTGACGGA CCGCGCGGGC
GCGGTGTGTG TCGTGATGGT CGCGGATTGC CTGCCGGTGC TGCTGTGCGA CGCGCAGGGC
CGGGCGGTCG GCGCCGCGCA CGCGGGCTGG CGCGGGCTCG CGGCCGGCAT CATCGAACAG
ACCGCGGCTC GCGTCGCGGC GCTCGCCGGC GGCGCGGCGG ATGAAGTCCA TGCGTACCTC
GGGCCGGCGA TCGGCCCGCA GGCGTTCGAA GTCGGCGCCG ACGTGCGCGA CGCGTTTCTC
GACACGGCTG CGCAGTCGGA GCATGATGAG ACGCGGCAAG CGTTCGTCGC GATCGACGGC
GCGCCCGGCA AGTTCCTCGC CGACCTCCAT GCGCTCGCGC GCCTGCGCCT CGCGCGTGCG
GGTGTTGCGC ACGTGAGCGG CGGGTCCGCC TGCACGGTCA CCGAACGCAC GCGCTTCTAT
TCATATCGGC GCGACCGCGT GACCGGCCGC ATGGCGGCGG CGGTCTGGCT GGCCGATTGA
 
Protein sequence
MTNLAPLTWQ DCVQPDWQVS PRVRALITTR DGGVSEGSYG RWRDGAELPG GMNLGLHTGD 
DPAHVGANRA RLLALAGQSR AAWLEQVHGA RIVRADEVID AAPGAAVPVQ ADASVTDRAG
AVCVVMVADC LPVLLCDAQG RAVGAAHAGW RGLAAGIIEQ TAARVAALAG GAADEVHAYL
GPAIGPQAFE VGADVRDAFL DTAAQSEHDE TRQAFVAIDG APGKFLADLH ALARLRLARA
GVAHVSGGSA CTVTERTRFY SYRRDRVTGR MAAAVWLAD