| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1700 |
|---|
| Symbol | |
|---|
| ID | 6177158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1898115 |
|---|
| End bp | 1898855 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641681459 |
|---|
| Product | acetyacetyl-CoA reductase |
|---|
| Protein accession | YP_001808401 |
|---|
| Protein GI | 172060749 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGC GAATTGCGTA CGTAACGGGC GGGATGGGCG GCATCGGCAC CAGCATCTGC
CAGCGTCTGT TGAAAGACGG CTTCAAGGTG GTCGCGGGTT GCGGCCCGAA CTCGCCGCGC
CGTGTGAAAT GGCTCGAGGA CCAGAAGGCG CTCGGCTACG ATTTCATCGC GTCGGAAGGC
AACGTCGGCG ACTGGGACTC GACCAAGGCA GCGTTCGACA AGGTCAAGGC CGAAGTCGGC
GAGATCGACG TGCTGGTCAA CAACGCGGGC ATCACGCGCG ACGTCGTGTT CCGCAAGATG
ACGCACGAAG ACTGGACGGC CGTGATCGAC ACCAACCTGA CGAGCCTGTT CAACGTGACG
AAGCAGGTGA TCGACGGCAT GGTCGAGCGT GGCTGGGGCC GGATCATCAA CATTTCGTCG
GTGAACGGCC AGAAGGGGCA ATTCGGGCAG ACGAACTACT CGACCGCGAA GGCCGGCATC
CACGGTTTCA CGATGTCGCT CGCGCAGGAA GTCGCAACGA AGGGCGTGAC GGTCAACACC
GTTTCCCCCG GCTACATCGG CACCGACATG GTGAAGGCGA TCCGTCCGGA CGTGCTCGAG
AAGATCGTCG CGACGATCCC GGTGCGTCGT CTTGGCGCAC CGGAGGAAAT CGGTTCGATC
GTCGCATGGC TCGCGTCGAA CGAATCCGGT TTTTCGACGG GCGCCGACTT CTCGCTGAAC
GGCGGCCTGC ACATGGGCTG A
|
|---|
| Protein sequence | MSQRIAYVTG GMGGIGTSIC QRLLKDGFKV VAGCGPNSPR RVKWLEDQKA LGYDFIASEG
NVGDWDSTKA AFDKVKAEVG EIDVLVNNAG ITRDVVFRKM THEDWTAVID TNLTSLFNVT
KQVIDGMVER GWGRIINISS VNGQKGQFGQ TNYSTAKAGI HGFTMSLAQE VATKGVTVNT
VSPGYIGTDM VKAIRPDVLE KIVATIPVRR LGAPEEIGSI VAWLASNESG FSTGADFSLN
GGLHMG
|
|---|
| |