| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1695 |
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| Symbol | rimO |
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| ID | 6177419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1893718 |
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| End bp | 1895079 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681455 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001808397 |
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| Protein GI | 172060745 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.184719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGT CCCCCAAAGT AGGCTTCGTA TCGCTCGGGT GCCCGAAAGC CCTCGTCGAC
TCCGAACAAA TCATCACGCA GCTGCGCGCC GAAGGTTATG AAATCTCCGG CACGTACGAC
GGCGCCGACC TGGTCGTCGT CAACACCTGC GGTTTCATCG ACGAAGCGGT GCAGGAAAGC
CTCGATGCAA TCGGCGAAGC GCTGACCGAG AACGGCAAGG TGATCGTCAC CGGCTGCCTC
GGCGCGAAGT CCAGCGCGAG CGGTTCGAAC CTCATCGAGG AAGTCCATCC GAAGGTGCTC
GCCGTCACCG GCCCGCACGC GGTGGGCGAA GTGATGCAGG CCGTGCATTC GCACCTGCCG
AAGCCGCACG ACCCGTTCGT CGATCTCGTG CCGGCCGCCG GCATCAAGCT CACGCCGCGC
CACTACGCAT ACCTGAAGAT CTCCGAAGGC TGCAACCACC GCTGCACGTT CTGCATCATC
CCGTCGATGC GCGGCGATCT CGTATCGCGT CCGGTCGCCG AGGTGATGCT CGAGGCGGAG
AACCTGTTCA AGTCGGGCGT GAAGGAACTG CTGGTGATCT CGCAGGACAC GAGCGCATAC
GGCGTCGACG TGAAGTACCG CACGGGCTTC TGGAACGGCA AGCCGATCAA GACGCGCATG
ACCGACCTGG TCGCCGCGCT CGGCGAACTC GCCGCGCAGT ACGGTGCATG GGTGCGCTTG
CACTACGTGT ATCCGTATCC GAGCGTCGAC GAAGTCATTC CGCTGATGGC CGAAGGCCCG
TTCAAGGGCC ACGTGCTGCC GTATCTCGAC GTGCCGTTCC AGCACGCGCA TCCGGAAGTG
CTCAAGCGCA TGAAGCGCCC GGCCAACGCG GAGAAGGTGC TCGAGCGCGT GCAGAAGTGG
CGCGAGATCT GCCCGGACCT GACGATCCGC AGCACGTTCA TCGCCGGCTT CCCCGGCGAG
ACGGAGGAGC AGTTCGAAAC GCTGCTCGAC TTCATCCGCG AAGCGGAACT CGATCGCGTC
GGCTGCTTTG CGTATTCGCC GGTCGAAGGC GCGACCGCGA ACGAACTGGA CGGCGCGCTG
CCGGACGACG TTCGCGAAGC ACGCCGCGCG CGCTTCATGG AAGTCGCCGA GGAAGTGTCG
GCGCAGCGCA TCCAGCGCAA GGTCGGCAAG ACCCTCAAGG TGCTGATCGA CGAAGTCAGC
GCAGAAGGCG GCATCGGCCG CACGGCGGCG GATGCGCCGG AGATCGACGG CGTCGTCTAC
GTCGAGCCGG CGACGAAGGC GTCGAAGCGC TACAAGGTCG GCGACTTCGT GTCGGTGAAG
ATCACGGGCG CGGACGGCCA CGACCTGTGG GGCGAGGTTT AA
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| Protein sequence | MSQSPKVGFV SLGCPKALVD SEQIITQLRA EGYEISGTYD GADLVVVNTC GFIDEAVQES
LDAIGEALTE NGKVIVTGCL GAKSSASGSN LIEEVHPKVL AVTGPHAVGE VMQAVHSHLP
KPHDPFVDLV PAAGIKLTPR HYAYLKISEG CNHRCTFCII PSMRGDLVSR PVAEVMLEAE
NLFKSGVKEL LVISQDTSAY GVDVKYRTGF WNGKPIKTRM TDLVAALGEL AAQYGAWVRL
HYVYPYPSVD EVIPLMAEGP FKGHVLPYLD VPFQHAHPEV LKRMKRPANA EKVLERVQKW
REICPDLTIR STFIAGFPGE TEEQFETLLD FIREAELDRV GCFAYSPVEG ATANELDGAL
PDDVREARRA RFMEVAEEVS AQRIQRKVGK TLKVLIDEVS AEGGIGRTAA DAPEIDGVVY
VEPATKASKR YKVGDFVSVK ITGADGHDLW GEV
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