| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1694 |
|---|
| Symbol | |
|---|
| ID | 6177468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1892788 |
|---|
| End bp | 1893714 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641681454 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001808396 |
|---|
| Protein GI | 172060744 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCG CATTTCCGGA GATCCTCGCG CTCGGCGAGG CGATGATCGA ATTCAACCAG
TCGCAGCCGG GGCGTCCCGA GTTCCTGCAG GGCTTCGGCG GCGACACGTC GAACTTCTGC
ATCGCCGCGG CGCGGCAGGG CGCGTCGACG GGCTTCGTGT CGGCGATCGG TGACGATCCG
TTTGGCCGCT TGCTGACCGG CATGTGGGCG GCGGAACACG TCGACACGAC CTACGTGCGG
ATCGACCGGA CGGCGCCGAC CGGCGTGTAT TTCGTCACGC ACGGCGTCGA CGGCCACCAG
TTCGACTATC TGCGCGCGGG CTCCGCGGCG AGCCGCTACA CGGTGGCCGA CCTGCCGCTC
GACGCGCTCG CCGCGGCGAA GGCGGTGCAC CTGTCGGGCA TCAGCCTCGC GATCAGCGCG
GCCGCGTGCG ACGCCGCGTT CGCGGCGATC GACCATGCGC GCAGCAACGG CGCGCAGGTC
AGCTTCGACA CGAACCTGCG CCTGAAGCTG TGGCCGCTGC CGCGCGCCCG CGCGGTGATG
CGCGAGGCGC TGCGCCAGAC GGACATCTGC CTGCCGAGCT GGGACGACGT CACGGCGCTC
ACGGGCGCGA ACGATCGCGA CGCGATCGTC GATGCGATGC TCGAGCACGG GCCGCGGGTC
GTCGCGCTGA AGCTCGGCAA GGAAGGCGCG TATGTCGCGA CGCCGAACGA ACGGCGCGTG
GTGCCGGGCT TCGCGGTCGA GGCCGTCGAT GCGACGGGCG CGGGCGACTG CTTCGGCGGC
GCGTTCGTCG CGCGGATCGT CGCGGGCGAC GATCCGTTCG CGGCCGCGCG TTATGCGAAC
GCGGCAGCGG CGCTGTCGAC GACGGGCTAC GGCGCGGTCG CGCCGATTCC GCACCGCGAG
GCGGTGGAAC GTCTGGTGCA GGGCTGA
|
|---|
| Protein sequence | MTAAFPEILA LGEAMIEFNQ SQPGRPEFLQ GFGGDTSNFC IAAARQGAST GFVSAIGDDP
FGRLLTGMWA AEHVDTTYVR IDRTAPTGVY FVTHGVDGHQ FDYLRAGSAA SRYTVADLPL
DALAAAKAVH LSGISLAISA AACDAAFAAI DHARSNGAQV SFDTNLRLKL WPLPRARAVM
REALRQTDIC LPSWDDVTAL TGANDRDAIV DAMLEHGPRV VALKLGKEGA YVATPNERRV
VPGFAVEAVD ATGAGDCFGG AFVARIVAGD DPFAAARYAN AAAALSTTGY GAVAPIPHRE
AVERLVQG
|
|---|
| |