Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1685 |
Symbol | |
ID | 6176569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1885323 |
End bp | 1886126 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681445 |
Product | hypothetical protein |
Protein accession | YP_001808387 |
Protein GI | 172060735 |
COG category | [R] General function prediction only |
COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCGT CCCTGCAGGA ACTGAGTCTC GTCGACGTCG GCATCGCCGC CGCCCTCGTC GCGGTCAACG GCGCGATCTC GGCCGCGCTG TCGCTCGGCC TCGGGCGCAA GCTCGCGCTC GCCGCCGTGC GCACCGTCGT GCAGCTGCTC GCGATCGGCT ACGTGCTCGG CTGGGTGTTC GGCCACCCGC ACTGGAGCGT CGTGCTGCCG CTCACCGCGC TGATGACGTT GATCGCCGGC TTGGCGGGCG CCGGTCGCGG CAAGCATGCG TATCGCAGAC AACGCGTCGA CAGCATCGCG TCGATCTGGT TCAGCAGCTG GTTCGTCGCG GCAATCGGCC TGTTCGTCGT GATCCGCATT CATCCGTGGT ACGCGCCGCA ATATGTGATC CCGATCCTCG GCATGATCCT CGGCAATACG CTGACGGGCG TGTCGCTCGG CGTCGAGCGG ATGATGGAGG AACTGACCGC GCGGCGCGAT CGCGTCGAGA CCGCACTCGC GCTCGGCGCA ACGCGCTGGG AAGCCGCGCA GGACGCCGCG CGCCAAGCGG TGCGCGCGGG CATGCTGCCG ACGCTCAACC AGATGGCCGT GGTCGGCGTC GTGAGCCTGC CGGGGATGAT GACGGGTCAG GTGCTGGCCG GCCAGTCGCC GCTGCAGGCC GTGCGCTATC AGATCGTGAT CATGTTCCTG ATCGCCGCGG CATCCGCGCT CGGTACCGTC GGCGCGGTGC TGATGACGTA TCGCCGGCTG TTCTCGGCCG ATCACCGCTT TCTCGCGTCG CGGCTCGAGG AACGCGCGCC GTGA
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Protein sequence | MSPSLQELSL VDVGIAAALV AVNGAISAAL SLGLGRKLAL AAVRTVVQLL AIGYVLGWVF GHPHWSVVLP LTALMTLIAG LAGAGRGKHA YRRQRVDSIA SIWFSSWFVA AIGLFVVIRI HPWYAPQYVI PILGMILGNT LTGVSLGVER MMEELTARRD RVETALALGA TRWEAAQDAA RQAVRAGMLP TLNQMAVVGV VSLPGMMTGQ VLAGQSPLQA VRYQIVIMFL IAAASALGTV GAVLMTYRRL FSADHRFLAS RLEERAP
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