Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1684 |
Symbol | |
ID | 6176750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1884625 |
End bp | 1885326 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641681444 |
Product | ABC transporter related |
Protein accession | YP_001808386 |
Protein GI | 172060734 |
COG category | [R] General function prediction only |
COG ID | [COG4619] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC CCACCGGCCT CATCGATGCG CAACAGATCA CGCGCCGCGA CGCCAGCAGC GGCAAGACGT TGCTGACGCC GACCGACTTC AGCCTCGCCG CGGGATCGCG AATTGCTATC ACGGGAGCGT CGGGTTCCGG CAAGAGCGTG CTGCTGCGCG CGCTTGCGTT GCTCGATCCG CTCGACGGCG GTCACATCCT GTGGCGCGGC AAGCGCATCC GGCGCGGCGC GATTCCGGGC TACCGGCGCC GTGTCGCGTA CGTGCGCCAG CGGCCCGCGC AGATGGACGG CACCGTCGAA GCGCAATTGC GCTACCCGTA CTCGCTCGCG ATCTATCGCG ACGCGACGTT CGACCGTGCG CGCGCCGAAG CACTCGCGGC GCGCGCCGGT CGCGGCGCCG ACTTTCTCGA CAAGCGTGCG AGCGAATTGT CGGGCGGCGA AGCGCAGATC GCCGCGCTGC TGCGCGTGCT GCAGCTCGAT CCCGACGTGC TGCTGCTCGA CGAGCCGACA TCCGCGCTCG ACCCCGAGTC GACGCGCGCA ATCGAAGCGC TCGTCGGCGC GTGGTTCGAC GCGGCGCCCG ACGCGCGCGC GTACATGTGG ATCTCGCACG ATCCGGCGCA GGCCGCGCGG ATCGGCACGA TGCGGCTCGT GATGCAGGCC GGCGTGCTGC ACGCCGCGCG CGCGACGCAG GCGGCGCAAT GA
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Protein sequence | MTVPTGLIDA QQITRRDASS GKTLLTPTDF SLAAGSRIAI TGASGSGKSV LLRALALLDP LDGGHILWRG KRIRRGAIPG YRRRVAYVRQ RPAQMDGTVE AQLRYPYSLA IYRDATFDRA RAEALAARAG RGADFLDKRA SELSGGEAQI AALLRVLQLD PDVLLLDEPT SALDPESTRA IEALVGAWFD AAPDARAYMW ISHDPAQAAR IGTMRLVMQA GVLHAARATQ AAQ
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