Gene BamMC406_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1684 
Symbol 
ID6176750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1884625 
End bp1885326 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID641681444 
ProductABC transporter related 
Protein accessionYP_001808386 
Protein GI172060734 
COG category[R] General function prediction only 
COG ID[COG4619] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC CCACCGGCCT CATCGATGCG CAACAGATCA CGCGCCGCGA CGCCAGCAGC 
GGCAAGACGT TGCTGACGCC GACCGACTTC AGCCTCGCCG CGGGATCGCG AATTGCTATC
ACGGGAGCGT CGGGTTCCGG CAAGAGCGTG CTGCTGCGCG CGCTTGCGTT GCTCGATCCG
CTCGACGGCG GTCACATCCT GTGGCGCGGC AAGCGCATCC GGCGCGGCGC GATTCCGGGC
TACCGGCGCC GTGTCGCGTA CGTGCGCCAG CGGCCCGCGC AGATGGACGG CACCGTCGAA
GCGCAATTGC GCTACCCGTA CTCGCTCGCG ATCTATCGCG ACGCGACGTT CGACCGTGCG
CGCGCCGAAG CACTCGCGGC GCGCGCCGGT CGCGGCGCCG ACTTTCTCGA CAAGCGTGCG
AGCGAATTGT CGGGCGGCGA AGCGCAGATC GCCGCGCTGC TGCGCGTGCT GCAGCTCGAT
CCCGACGTGC TGCTGCTCGA CGAGCCGACA TCCGCGCTCG ACCCCGAGTC GACGCGCGCA
ATCGAAGCGC TCGTCGGCGC GTGGTTCGAC GCGGCGCCCG ACGCGCGCGC GTACATGTGG
ATCTCGCACG ATCCGGCGCA GGCCGCGCGG ATCGGCACGA TGCGGCTCGT GATGCAGGCC
GGCGTGCTGC ACGCCGCGCG CGCGACGCAG GCGGCGCAAT GA
 
Protein sequence
MTVPTGLIDA QQITRRDASS GKTLLTPTDF SLAAGSRIAI TGASGSGKSV LLRALALLDP 
LDGGHILWRG KRIRRGAIPG YRRRVAYVRQ RPAQMDGTVE AQLRYPYSLA IYRDATFDRA
RAEALAARAG RGADFLDKRA SELSGGEAQI AALLRVLQLD PDVLLLDEPT SALDPESTRA
IEALVGAWFD AAPDARAYMW ISHDPAQAAR IGTMRLVMQA GVLHAARATQ AAQ