| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1683 |
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| Symbol | |
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| ID | 6176724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1882176 |
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| End bp | 1884473 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681443 |
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| Product | AsmA family protein |
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| Protein accession | YP_001808385 |
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| Protein GI | 172060733 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTAG CTCGAGCCAT CGGCAAGTCG GCTGCATGGA TCGTCGGTAT CGTCGCACTG
ATCATCGCGG CAACCGGCGT CTTCATTTTC ACGTTCGACT GGAACCACGC GAAACCGTGG
GTCAACGAAC ATGTGAGCAC CGCACTTGGC CGTTCGTTTG CGATCCACGG CGATCTCAGG
GTCGACTGGC ATCGCCCGCA AGGCGAGACC GGCTGGCGCG CATGGGTGCC CTGGCCGCGC
TTCTCGGCCA CGCAGCTCGA GATCGGCAAC CCCGACTGGG CGAAGGGCCC GAAGTTCGTC
ACGCTCGACG CCACCCACTT CGATCTCGCG ATTCTCCCGC TCTTCACGCA CCAGATCGTC
ATTCCTTCGA TCGACGCCGT CAATCCCGCA GTCGACCTCG AGCGGCTCGC CGATGGCCGC
AACACGTGGA CCTTCGAATT CAAGCAATCG GGCAAGCCGA CGCGGTGGAA CCTGCGGCTC
GACAGCTTCG CGTTCGCGAA GGGGACCATC GTCTATCGCG ACGCGATCAC CCAGGCCGAT
CTCACGATCG CGGTGGATAC GCTCGGCCAT CCGATTCCGA TCGGCGACGT GCTGAAGGAG
CAGGAACAGA CCTCGCTCGC GGCGTCCGCC CAGCATGTCG GCAAGCAGGG GGCCGCGCAG
ATGGCCGCAA AGGCGCATGC GGAGGCCGCG TCGGCTGCGT CGGGTGCATC CGCCGCACAG
GGGGCGAGCG CGGCGTCGGC GCCCGTGGTC GCATCGGGGG CGGCGTCTGC CTCCGCTGCC
AGGGCGGTCT CATCAGCATC GACGGCCGTG CCGGCATCCG CCGCGAGCGG CGCATCCGGC
GTCGCGGTGC CCGCGAAGTC GGAGCCGACG TATGCGTTCG GCCTCAAGGT CGACGGCCGC
TACAAGAACG TGCCGGTGAC CGGCACCGGC AAGGTGGGCG GCGTGCTGGC GGTCGAGAGC
GCGACGCAGC CGTTCCCGCT GCAGGCTGAC GTGAAGGCCG GCGATACGCG GCTCGCGATC
GTCGGCACGC TGACCGATCC GCGGCATCTC GCGGCGCTCA ACATGCGGCT GTGGCTGCAG
GGCACGTCGA TGTCGCACCT CTACCAGCTC ACCGGCATCA CGCTGCCCGA CACGCCGCCG
TATGCGACCG ACGGACGGCT GATCGGCAAC TTCAATCCGC CCACGAGCAC GTTCCGCTAC
GAGAACTTCA AGGGCCGCGT CGGCGGCAGC GATCTGCACG GCACGCTCAC CTGGGCGCAG
CGCAAGCCGC GGCCGAAGCT GTCGGGCGAA GTCGTGTCGA ACCTGCTGCA GTTCTCCGAC
CTCGCGCCGG TGATCGGCGC CGACTCGCCT GCGAGCAAGG CGAAGCGCGG CGACACGACG
CGCCAGCCGC CGGACCGCGT GCTGCCGGTC GCGGCGTTCC GCACCGAGCG CTGGAGCGCG
ATCGACGCGG ACGTGAAATT CACCGGTCGC AAGCTGATCA AGAGCCCGCA GTTGCCGATC
ACCAACCTGT ACACGCACAT CCTGCTGCAG GATGGCGTGC TGACGCTCGA GCCGCTGCAA
TTCGGCGTCG CTGGCGGTAC GCTCGCGACG AATGCGCATC TCGACGGCAG CCGCACGCCG
CTGAAGGGCC GCTTCACGCT GAGCGCGCGC CATCTGAAGC TCAAGCAGCT GTTCCCGACG
CAGAAGGTGA TGCAGACCGC GCTCGGCGAG ATCAACGGCG ATGCGTCGCT GTCCGCGACC
GGCAACTCGC CGGCCGCGCT CGCCGCGACG TCGACCGGCG AGGTGAAGGC GCTCATCACC
GACGGCCGCA TCAGCCTGCT GCTGATGGAG GCGGCGGGCC TGAACGTCGC AAACGTCGTC
TACGAGAAGC TGTTCGGCAC CCGCGACGTG AAGATCAATT GCGCGGCGTT CGATTTCGTC
GCGAACGACG GCATGCTCGA GCCGAAGGTC TTCGCGCTCG ATACGGACGA CGCGCTGATC
AACGTCGACG GCCCGGTCAA CCTGCGCGAC GAATCGGTCG ACCTGAAGAT CCATCCGCAC
ACGAAGGGTT TCCGGATCTT CTCGCTGCGC TCGCCGCTGT ACGCGAAGGG CACGTTCAAG
AATCCGAAGG TCGGCGTCGA GGCGGGCGCG CTCGCGCTGC GCGCCGGCGC GGCGGTCGGG
CTTGGGCTGA TCAACCCGTT CGCGGCGCTG ATTCCGCTGA TCGCGCCGAG CAACAACCGC
GACGTGCCGT GTTCGCAGCT GTTCGGGCAG ATGAAGGCCA AGGCGGCGGA GAAAGAAGCG
GCGAAAGCCG GCAAGTGA
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| Protein sequence | MTLARAIGKS AAWIVGIVAL IIAATGVFIF TFDWNHAKPW VNEHVSTALG RSFAIHGDLR
VDWHRPQGET GWRAWVPWPR FSATQLEIGN PDWAKGPKFV TLDATHFDLA ILPLFTHQIV
IPSIDAVNPA VDLERLADGR NTWTFEFKQS GKPTRWNLRL DSFAFAKGTI VYRDAITQAD
LTIAVDTLGH PIPIGDVLKE QEQTSLAASA QHVGKQGAAQ MAAKAHAEAA SAASGASAAQ
GASAASAPVV ASGAASASAA RAVSSASTAV PASAASGASG VAVPAKSEPT YAFGLKVDGR
YKNVPVTGTG KVGGVLAVES ATQPFPLQAD VKAGDTRLAI VGTLTDPRHL AALNMRLWLQ
GTSMSHLYQL TGITLPDTPP YATDGRLIGN FNPPTSTFRY ENFKGRVGGS DLHGTLTWAQ
RKPRPKLSGE VVSNLLQFSD LAPVIGADSP ASKAKRGDTT RQPPDRVLPV AAFRTERWSA
IDADVKFTGR KLIKSPQLPI TNLYTHILLQ DGVLTLEPLQ FGVAGGTLAT NAHLDGSRTP
LKGRFTLSAR HLKLKQLFPT QKVMQTALGE INGDASLSAT GNSPAALAAT STGEVKALIT
DGRISLLLME AAGLNVANVV YEKLFGTRDV KINCAAFDFV ANDGMLEPKV FALDTDDALI
NVDGPVNLRD ESVDLKIHPH TKGFRIFSLR SPLYAKGTFK NPKVGVEAGA LALRAGAAVG
LGLINPFAAL IPLIAPSNNR DVPCSQLFGQ MKAKAAEKEA AKAGK
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