| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1670 |
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| Symbol | |
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| ID | 6176422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1869977 |
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| End bp | 1870906 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641681431 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001808373 |
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| Protein GI | 172060721 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0925484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGT TCAAGTCCCT GCTCGCATGG CCGGTGCGGC GCTTCAACCT GACCGGCGGC
TCGGCGGTCG TCGCGGGGCC GTACACATGG CTCGTGCTGT TCTTCCTCGT GCCGTTCGTG
CTGGTCGTGA AAATCAGCTT CGCGGAGCTG CAGCTCGGCA TCCCGCCGTA CACGGAACTC
GCGTCGTACA CCGACGGCGT GGTGCACATC GCGCTGAACC TGTCGCACTA CGCGTTCCTG
CTCACCGACA GCCTGTATTT CGCGACCTAC GTGAATTCGG TGGTGGTCGC CGCGATCACG
ACGGTGCTGT GCCTGCTGAT CGGCTATCCG ATGGCGTACT ACATCGCGCG TTCGAACCCG
GCGACCCGCA ACCTGCTGAT GATGGGCGTG ATGCTGCCGT TCTGGACGTC GTTCCTGATC
CGCGTGTACG CATGGATCGG GATCCTGAAG AACAACGGGC TGCTGAACAA CTTCCTGATG
TGGATCGGCC TGACCCATAC GCCGATCGAG CTGTACCGCA CCAACTACGC GGTGTACATC
GGGATGGTGT ATTCGTACCT GCCGTTCCTC GTGATGCCGC TGTACGCGCA CCTCGTGAAG
ATGGACCTGC GCCTGCTCGA AGCCGCGTAT GACCTGGGCG CCCGGCCGTG GCGGGCGTTC
GTGCAGATCA CGCTGCCGCT GTCGAGGAAC GGAATCATCG CGGGCTGCCT GCTGGTGTTC
ATTCCGGCGG TCGGCGAGTA CGTGATTCCG GAACTGCTCG GCGGCGCGAA CACGCTGATG
ATCGGTCGCG TGATGTGGAA TGAGTTCTTC AACAACGCAG ACTGGCCGAT GGCGTCGGCC
GTGACCTGTG CGATGGTGCT GCTGCTGCTC GTGCCGATGG CGATGTTCCA GCACTTCCAG
GCGAAGGAGC AGGAGGGCCG CCGTCGATGA
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| Protein sequence | MNAFKSLLAW PVRRFNLTGG SAVVAGPYTW LVLFFLVPFV LVVKISFAEL QLGIPPYTEL
ASYTDGVVHI ALNLSHYAFL LTDSLYFATY VNSVVVAAIT TVLCLLIGYP MAYYIARSNP
ATRNLLMMGV MLPFWTSFLI RVYAWIGILK NNGLLNNFLM WIGLTHTPIE LYRTNYAVYI
GMVYSYLPFL VMPLYAHLVK MDLRLLEAAY DLGARPWRAF VQITLPLSRN GIIAGCLLVF
IPAVGEYVIP ELLGGANTLM IGRVMWNEFF NNADWPMASA VTCAMVLLLL VPMAMFQHFQ
AKEQEGRRR
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