| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1669 |
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| Symbol | |
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| ID | 6176411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1869159 |
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| End bp | 1869980 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681430 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_001808372 |
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| Protein GI | 172060720 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.343722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGA ATCGCTACCT GCAGTTCGCG GCGCTGTTTG CCGGCTTCGC GTTCCTGTAC
ATCCCGATCA TCAGCCTGAT CGTCTATTCG TTCAACGAGT CGAAGCTCGT CACCGTGTGG
TCGGGCTTCT CGTTGCGCTG GTATGCGGCG CTCGTGGACG ACGACGAGCT GCTGACGGCC
GCGTGGCTGT CGCTGAAGAT CGGCGTGCTG ACCGCGTTCG CGTCGGTGTT CATCGGCACG
TGGGCCGGCT TCGTGCTCGC GCGGATGGGC CGCTTTCGCG GCTTCGCGCT GTTCAGCGGG
ATGATCAACG CGCCGCTCGT GATTCCCGAG GTGATCCAGG GCATCTCGCT GCTGCTGCTG
TTCATCGAGC TGGCGAAGTG GATCGGCTGG CCCGCCGAGC GCGGCGTGTT CACGATCTGG
CTCGGCCACG TGATGCTGTG CATCTCGTAC GTCGCGATCA TCGTGCAGTC GCGCGTGCGC
GAGCTGAACC CGTCGCTCGA GGAAGCCGCG CTCGATCTGG GCGCGACGCC GCTGAAGGTG
TTCTTCACGA TCACGCTGCC GCTGATCTCG CAGGCGCTGA TCGCGGGCTG GCTGCTGGCG
TTTACGCTGT CGATCGACGA CCTCGTGCTG TCGGCGTTCC TGTCGGGCCC CGGTTCGACG
ACGCTGCCGC TCGTCGTGTT CTCGCGCGTG CGCCTCGGCC TGAATCCGGA GATGAACGCG
CTCGCGACGC TGTTCATCAT CGCGGTGACG GCAGGCGTCG TGATCGCGAA CTTCGTGATG
CTGCGTCAGG AACGCAAGCG GATGGCCGCG TTCGCCGTCT GA
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| Protein sequence | MKPNRYLQFA ALFAGFAFLY IPIISLIVYS FNESKLVTVW SGFSLRWYAA LVDDDELLTA
AWLSLKIGVL TAFASVFIGT WAGFVLARMG RFRGFALFSG MINAPLVIPE VIQGISLLLL
FIELAKWIGW PAERGVFTIW LGHVMLCISY VAIIVQSRVR ELNPSLEEAA LDLGATPLKV
FFTITLPLIS QALIAGWLLA FTLSIDDLVL SAFLSGPGST TLPLVVFSRV RLGLNPEMNA
LATLFIIAVT AGVVIANFVM LRQERKRMAA FAV
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