Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1661 |
Symbol | |
ID | 6177360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1857401 |
End bp | 1860544 |
Gene Length | 3144 bp |
Protein Length | 1047 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641681422 |
Product | acriflavin resistance protein |
Protein accession | YP_001808364 |
Protein GI | 172060712 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.349766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCC CCCGCGAAGA AGGCCGCTTC AACCTGTCGG CATGGGCGCT GCGCCACCAG GCGCTGGTCG TCTACCTGAT CGCGCTCGCG ACGCTCGCGG GCATCCTCGC GTACACGCGG CTCGCGCAAT CCGAAGATCC GCCGTTCACG TTCCGCGTGA TGGTGATCCG CACGTTCTGG CCCGGCGCGA GCGCGCGGCA GGTGCAGGAA CAGGTGACTG ACCGGATCGG CCGCAAGCTG CAGGAAACGC CGGCCATCGA CTTCCTGCGC AGCTATTCGC GGCCCGGCGA ATCGCTGATC TTCTTCACGA TGAAGGACGC GGCGCCCGTG AAGGACGTGC CCGAGACCTG GTACCAGATC CGCAAGAAGG TCGGCGACAT CGGCTATACG CTGCCGCCCG GCGTGCAGGG CCCGTTCTTC AACGACGAGT TCGGCGACGT CTACACCAAC ATCTGGACGC TCGAAGGCGA CGGCTTCACG CCCGCGCAGC TCCACGACTA TGCGGACCAG CTGCGCACCG TGCTGTTGCG CGTGCCGGGC GTCGGCAAGG TCGACTACTT CGGCGACCCC GACCAGCGGA TCTTCATCGA GGCCGACAAC ACGCAGCTCA CGCGCCTCGG CATCTCGCCG CAGCAGCTCG GGCAGGCCAT CAACGCGCAG AACGACATCT CGTCGGCCGG CGTGCTGACG ACCGCCGACG ATCGCGTGTT CGTGCGGCCG AGCGGCCAGT TCGACAACGT CGCGGCGATC GCCGACACGC TGATCCGGAT CAACGGCCGC ACGTTCCGGC TCGGCGATCT CGCGACGGTG AAGCGCGGCT ATGACGATCC GGTCGTCACG CAGATGCGGG CGAACGGCCA TGCCGTGCTC GGCATCGGCG TGACGATGCA GCCGGGCGGC GACGTGATCC GGCTCGGCAA GGCGCTCGAT GCCGAATCGA AGGACCTGCA GGCGCAGCTG CCGGCGGGCC TCAAGCTGAC GCTGGTGTCG AGCATGCCGC ACGCGGTCGC GCATTCGGTC GACGATTTCC TGGAAGCCGT CGCCGAAGCC GTCGCGATCG TGCTGGTCGT GAGCCTGGTG TCGCTCGGCC TGCGCACCGG GATGGTCGTC GTGATCTCGA TTCCGGTCGT GCTCGCCGTG ACCGCCCTCT TCATGTACCT GTTCGACATC GGGCTGCACA AGGTGTCGCT CGGCACGCTG GTGCTCGCGC TCGGGCTGCT CGTCGACGAC GCGATCATCG CGGTCGAGAT GATGGCCGTG AAGCTCGAAC AGGGCTACAG CCGCGCGCGC GCCGCCGCGT TCGCGTACAC GAGCACCGCG TTCCCGATGC TGACGGGCAC GCTCGTCACG GTGTCGGGCT TCCTGCCGAT CGCGCTCGCG AAGTCGAGCA CCGGCGAGTA CACGCGCTCG ATCTTCGAGG TGTCGGCGAT CGCGCTGATC GCGTCGTGGT TCGCGGCCGT CGTGCTGATC CCGCTGCTCG GCTATCACCT GCTGCCCGAG CGCAAGAAGC ACGCGCACGA AGCCCACCTG CCGGACGATC ACGAGCACGA CATCTACGAC ACGCGTTTCT ACCAGCGGCT GCGCGGCTGG GTCGACTGGT GCATCGAGCG GCGCTTCGTC GTGCTGCTGA TCACCGGCGC GCTGTTCGTC GTCGCGCTGA TGGGCTTCTC GCTCGTGCCG CAGCAGTTCT TCCCGAGCTC GGATCGCCCC GAGCTGCTCG TGGACGTGCG ATTGCCCGAA GGCGCGTCGT TCACGGCGAC GCTGCGCGAG ACCGAGCGCC TCGAGAAAAT ACTCGACAAG CGGCCCGAGA TCGATCATTC GGTGAACTTC GTCGGCAGCG GCGCGCCGCG CTTCTACCTG CCGCTCGACC AGCAGCTGCA GTTGCCGAAC TTCGCGCAGT TCGTCGTCAC CGCGAAATCG GTCAAGGATC GCGAGAAGCT CGCCACCTGG CTCGAAACCA CGCTGCGCGA CCAGTTCCCG GCCGTGCGCT GGCGCCTGTC GCGGCTCGAG AACGGCCCGC CCGTCGGCTA CCCCGTGCAG TTCCGCGTGA GCGGCGACGA CATCGCGACG GTGCGCTCGA TCGCCGAGAA GGTCGCGGCG ACGATGCGCG GCGACGCGCG CACGGTGAAC GTGCAGTTCG ACTGGGACGA GCCGGCCGAG CGCTCGGTGC GCTTCGAGCT CGACCAGAAG AAGGCGCGCG AGCTGAACGT GACGTCGCAG GACGTGTCGA GCTTCCTCGC GATGACGCTG TCCGGCACGA CCGTCACGCA GTATCGCGAA CGCGACAAGC TGATCGCGGT CGACCTGCGC GCCCCGCGTG CGGACCGCGT CGACCCGGCG AAGCTCGCGG GCCTCGCGCT GCCGACGCCG AACGGCCCCG TGCCGCTCGG CTCGCTCGGC CGCTTCACGC CGGCACTCGA ATACGGCGTG GTGTGGGAGC GCGACCGGCA GCCGACGATC ACCGTGCAGT CCGACGTACG CGCGGGCGCC CAGGGCATCG ACGTCACGCA TGCGATCGAC GGCAAGCTGA ATCCGTTGCG CGCGCAACTG CCGGTCGGCT ACCAGATCAA CATCGGCGGG TCGGTCGAGG AAAGCGCGAA AGCGCAGTCA TCGATCAACG CGCAGATGCC GCTGATGGCG ATCGCCGTGT TCACGCTGCT GATGATCCAG CTGCAGAGCT TCTCGCGCGT GCTGATGGTC GTGCTGACCG CGCCGCTCGG GCTGATCGGC GTGGTCGGCA CGCTGCTGCT GTTCGGCCAG CCGTTCGGCT TCGTCGCGAT GCTCGGCGTG ATCGCGATGT TCGGGATCAT CATGCGCAAC TCGGTGATTC TCGTCGACCA GATCGAGCAG GACATCGCGG CCGGCCACGG ACGCCTCGAC GCGATCGTCG GCGCGACCGT GCGGCGCTTC CGTCCGATCA CGCTGACGGC CGCGGCCGCC GTGCTCGCGC TGATCCCGCT GTTGCGCTCG AACTTCTTCG GGCCGATGGC GACCGCGCTG ATGGGCGGGA TCACGAGCGC GACCGTGCTG ACGCTGTTCT ACCTGCCCGC GCTGTACGCC GCGTGGTTCC GCGTGAAGCG CGACGAACGC GACCCGCACG AACCGCCGCA CGACGGCACG CCTGCCGCGC CGTCGGGAGT CTGA
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Protein sequence | MSGPREEGRF NLSAWALRHQ ALVVYLIALA TLAGILAYTR LAQSEDPPFT FRVMVIRTFW PGASARQVQE QVTDRIGRKL QETPAIDFLR SYSRPGESLI FFTMKDAAPV KDVPETWYQI RKKVGDIGYT LPPGVQGPFF NDEFGDVYTN IWTLEGDGFT PAQLHDYADQ LRTVLLRVPG VGKVDYFGDP DQRIFIEADN TQLTRLGISP QQLGQAINAQ NDISSAGVLT TADDRVFVRP SGQFDNVAAI ADTLIRINGR TFRLGDLATV KRGYDDPVVT QMRANGHAVL GIGVTMQPGG DVIRLGKALD AESKDLQAQL PAGLKLTLVS SMPHAVAHSV DDFLEAVAEA VAIVLVVSLV SLGLRTGMVV VISIPVVLAV TALFMYLFDI GLHKVSLGTL VLALGLLVDD AIIAVEMMAV KLEQGYSRAR AAAFAYTSTA FPMLTGTLVT VSGFLPIALA KSSTGEYTRS IFEVSAIALI ASWFAAVVLI PLLGYHLLPE RKKHAHEAHL PDDHEHDIYD TRFYQRLRGW VDWCIERRFV VLLITGALFV VALMGFSLVP QQFFPSSDRP ELLVDVRLPE GASFTATLRE TERLEKILDK RPEIDHSVNF VGSGAPRFYL PLDQQLQLPN FAQFVVTAKS VKDREKLATW LETTLRDQFP AVRWRLSRLE NGPPVGYPVQ FRVSGDDIAT VRSIAEKVAA TMRGDARTVN VQFDWDEPAE RSVRFELDQK KARELNVTSQ DVSSFLAMTL SGTTVTQYRE RDKLIAVDLR APRADRVDPA KLAGLALPTP NGPVPLGSLG RFTPALEYGV VWERDRQPTI TVQSDVRAGA QGIDVTHAID GKLNPLRAQL PVGYQINIGG SVEESAKAQS SINAQMPLMA IAVFTLLMIQ LQSFSRVLMV VLTAPLGLIG VVGTLLLFGQ PFGFVAMLGV IAMFGIIMRN SVILVDQIEQ DIAAGHGRLD AIVGATVRRF RPITLTAAAA VLALIPLLRS NFFGPMATAL MGGITSATVL TLFYLPALYA AWFRVKRDER DPHEPPHDGT PAAPSGV
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