| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1660 |
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| Symbol | |
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| ID | 6177341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1856319 |
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| End bp | 1857404 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641681421 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001808363 |
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| Protein GI | 172060711 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCTGA TCGGCACCGC GCTCGTCCTT GCCGCCTGTC ACCCGAAGGA AGCCGCGCCG
CCCGCGCCGC GCCCGGTCGT CGCGTTGCCC GCGCGCGCCG ACGGCGCCGC GGTCGCGACC
ACGCTGCCCG GCGAGATCCA GCCCCGTTAT GCGACGCCGC TGTCGTTCCG CATCGCCGGC
AAGATCATCG AGCGCAAGGT GCGGCTCGGC GATACGGTCA AGGCCGGCCA GGTCGTCGCG
CTGCTCGATC CGTCCGACGT CGAGAAGAAC GCCGCGAGTG CGCAGGCGCA GTTCGATGCC
GCGACGCACA GCCTCGCATT CGCGAAGCAG CAGCTCGAGC GCGACCGCGC GCAGGCGCGC
GAGAACCTGA TCGCGACCGC GCAGCTCGAA CAGACCCAGA ACAGCTACAC GTCGGCGCTC
GCGCAGCGCG ACCAGGCGCA GCAGCAGCTC GCGCTCGCGA AGAACCAGCT CCGCTATGCG
ACGCTCGTCG CCGATCACGC GGGCACCATC ACCGCGGAAC AGGCCGACAC CGGCCAGAAC
GTCTCGGCCG GCCAGGCCGT CTACCAGCTT GCGTGGTCGG GCGACGTCGA CGTCGTCAGC
GACGTGCCCG AGGCCGCGCT CGCGTCCCTC ACGCCCGGCC ATGCGGCGAG CGTCACGCTG
CCGTCGCTGC CGGGCCGCGA GTTCGCCGCG AAGGTGCGCG AGATCGCGCC GGCCGCCGAT
CCGCAGAGCC GCACCTATCG CGTGAAGCTC ACGCTCGCCG CGCCCGATCC GGCCGTGCGC
CTCGGGATGA CCACGAACGT CGCGTTCGAC GGCGCACCGG TTGCCGGCAA CGCGCCGAGC
ATCACGCTGC CCGCGACCGC GCTGTTCCAC GACGGCCCGC ATCCGGCCGT GTGGGTCGTG
CGCGCCAAGG ACGACACGCT CGAACTGCGC CGCGTCGAGG TCGCGCGCTT CAACGAACGC
ACCGTCACCG TGTCGCAGGG GCTACAGCCC GGCGAACGCG TCGTGCTGCA GGGCGTGCAT
ACGGTCAGCG CGGGCGAGAA GGTGCGGCCG GTCGCGCCGC TGCACCCGCA GGACTTCGCG
TCATGA
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| Protein sequence | MLLIGTALVL AACHPKEAAP PAPRPVVALP ARADGAAVAT TLPGEIQPRY ATPLSFRIAG
KIIERKVRLG DTVKAGQVVA LLDPSDVEKN AASAQAQFDA ATHSLAFAKQ QLERDRAQAR
ENLIATAQLE QTQNSYTSAL AQRDQAQQQL ALAKNQLRYA TLVADHAGTI TAEQADTGQN
VSAGQAVYQL AWSGDVDVVS DVPEAALASL TPGHAASVTL PSLPGREFAA KVREIAPAAD
PQSRTYRVKL TLAAPDPAVR LGMTTNVAFD GAPVAGNAPS ITLPATALFH DGPHPAVWVV
RAKDDTLELR RVEVARFNER TVTVSQGLQP GERVVLQGVH TVSAGEKVRP VAPLHPQDFA
S
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