| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1654 |
|---|
| Symbol | |
|---|
| ID | 6177187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1849529 |
|---|
| End bp | 1850521 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641681415 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001808357 |
|---|
| Protein GI | 172060705 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.909879 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG CACTCGATGT CGTGACCTAC GGCGAAGCGA TGGCGATGTT CGTCGCCGCC
GAGCCGTGCC ACCTCGCGCA CGCCGCGCAA TTCACGAAGC GGATCGCGGG CGCGGACCTG
AACGTCGCGA TCGGCCTGTC GCGGCTCGGC TTCCGGGTCG GCTGGATGAG CCGGGTCGGC
CGCGATTCGT TCGGCACCTA CGTGCTCGAC ACGCTCGCGC GCGAAGGCAT CGACGCGTCG
TGCGTGACCG TCGATCCGCG CTATCCGACC GGCTTCCAGC TGAAGTCGCG CAACGACGAC
GGCAGCGACC CGACCGTCGA ATATTTCCGC AAGGGCTCGG CCGCGAGCCA CCTGTCGTGC
GACGACTACG TCGCCGATTA CGTGCTCGGC GCACGGCACC TGCACCTGAC GGGCGTCGCG
CCGGCGATCT CCGCGACGTC GTGCGAGCTT GCGTTCCAGC TGGCGCGCGA GATGCGCGCG
GCCGGCAAGA CGATTTCGTT CGACCCGAAC CTGCGCCCGA CCCTGTGGCC GTCCGCGGAC
GTGATGGCGA AGACGCTGAA CGCGCTCGCG ACGCTCGCGG ACTGGGTGCT GCCGGGGCTC
GCCGAAGGGC GGCAGCTCAC CGGGCACGAC ACGCCGGCAG ACATCGCGGG CTTCTATCTG
GCACGCGGCG CGCGCGGCGT GGTGATCAAG CTGGGCCCCG AAGGCGCGTA TTTCCGCACG
GCCGACGGCC GCGCGGGCAC GGTGGCGGGC GAGCGCGTCG CGAAGGTGGT CGACACGGTC
GGCGCCGGCG ACGGCTTCGC GGTCGGCGTG GTCAGCGCGC TGCTGGAAGG ACGCTCCGTC
GAGCAGGCGG TCGCGCGCGG CAACCGCATC GGCGCGCTCG CGATCCAGGT GATCGGCGAT
TCGGAAGGCT TGCCGACCCG TGCGGCACTC GATCAACTCG AAAACGTCAG CAATCGCGCC
GATCGCTTAG AGGAAACCGT CACCGCGCAA TGA
|
|---|
| Protein sequence | MKAALDVVTY GEAMAMFVAA EPCHLAHAAQ FTKRIAGADL NVAIGLSRLG FRVGWMSRVG
RDSFGTYVLD TLAREGIDAS CVTVDPRYPT GFQLKSRNDD GSDPTVEYFR KGSAASHLSC
DDYVADYVLG ARHLHLTGVA PAISATSCEL AFQLAREMRA AGKTISFDPN LRPTLWPSAD
VMAKTLNALA TLADWVLPGL AEGRQLTGHD TPADIAGFYL ARGARGVVIK LGPEGAYFRT
ADGRAGTVAG ERVAKVVDTV GAGDGFAVGV VSALLEGRSV EQAVARGNRI GALAIQVIGD
SEGLPTRAAL DQLENVSNRA DRLEETVTAQ
|
|---|
| |