Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1640 |
Symbol | |
ID | 6176764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1837693 |
End bp | 1838181 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641681401 |
Product | YbaK/prolyl-tRNA synthetase associated region |
Protein accession | YP_001808343 |
Protein GI | 172060691 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.850648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTAT CAGCCACCCT GCAGGATTGC CTGCGCCAGA AGTCATCGCG GTACGAAGTC GTGTACCACC CGTATAGCCA TACCAGCATG GAGACGGCCG CCGCCGCGCA TATCCCCGGC GATCGCCTCG CGAAAACCGT GCTGCTCGAG GACGACGAAG GCTACGTCGC CGCCGTGCTG CCGACGTCGC ACGCGGTGCG ATTGTCGGAT CTCTGGGTCA AGACCGGCCG CCATCTCGTG CTCGCCAGGG AAATGGAACT GCGCGAACTG TTCAAGGATT GCGACCTGGG CGCGTTGCCG CCGGTGTGCA TGGCGTACGG GATGAAGACG TTCCTCGAGG AACAGCTCGC GCAGCAGCCT GAGGTATATT TCGAGGCCGG CGACCACGAA GCGCTGATCC ACATGACGCA GGACGAATTC CTGTCGCTGA TGGAGACGGC CGAGCGCGCG CATTTCTCGC ACAAGATGCA GGGGATGTGG GTTTCCTGA
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Protein sequence | MPVSATLQDC LRQKSSRYEV VYHPYSHTSM ETAAAAHIPG DRLAKTVLLE DDEGYVAAVL PTSHAVRLSD LWVKTGRHLV LAREMELREL FKDCDLGALP PVCMAYGMKT FLEEQLAQQP EVYFEAGDHE ALIHMTQDEF LSLMETAERA HFSHKMQGMW VS
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