Gene BamMC406_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1640 
Symbol 
ID6176764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1837693 
End bp1838181 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID641681401 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_001808343 
Protein GI172060691 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.850648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTAT CAGCCACCCT GCAGGATTGC CTGCGCCAGA AGTCATCGCG GTACGAAGTC 
GTGTACCACC CGTATAGCCA TACCAGCATG GAGACGGCCG CCGCCGCGCA TATCCCCGGC
GATCGCCTCG CGAAAACCGT GCTGCTCGAG GACGACGAAG GCTACGTCGC CGCCGTGCTG
CCGACGTCGC ACGCGGTGCG ATTGTCGGAT CTCTGGGTCA AGACCGGCCG CCATCTCGTG
CTCGCCAGGG AAATGGAACT GCGCGAACTG TTCAAGGATT GCGACCTGGG CGCGTTGCCG
CCGGTGTGCA TGGCGTACGG GATGAAGACG TTCCTCGAGG AACAGCTCGC GCAGCAGCCT
GAGGTATATT TCGAGGCCGG CGACCACGAA GCGCTGATCC ACATGACGCA GGACGAATTC
CTGTCGCTGA TGGAGACGGC CGAGCGCGCG CATTTCTCGC ACAAGATGCA GGGGATGTGG
GTTTCCTGA
 
Protein sequence
MPVSATLQDC LRQKSSRYEV VYHPYSHTSM ETAAAAHIPG DRLAKTVLLE DDEGYVAAVL 
PTSHAVRLSD LWVKTGRHLV LAREMELREL FKDCDLGALP PVCMAYGMKT FLEEQLAQQP
EVYFEAGDHE ALIHMTQDEF LSLMETAERA HFSHKMQGMW VS