| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1628 |
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| Symbol | |
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| ID | 6176459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1829296 |
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| End bp | 1830396 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641681389 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001808331 |
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| Protein GI | 172060679 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.879013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCCT CGACCGACAA CCGGACGCTG TTGCGCACGC TCGGCATCCG CACCCCGATC
ATCCAGGCGC CGATGGCCGG CGTCAGCACC CCCGCGCTGG CGGCAGCCGT GTCGAACGCG
GGCGGGCTCG GCTCGCTCGG CGTCGGCGCG ACGAACGCCG ACGGCGCGCG CAAGATGATC
CGCGACACGC GCGCGCTCAC CGACCGGCCG CTCAACATCA ACCTGTTCTG CCACCAGCCG
GCCCGTGCCG ACGCCGCCGT CGAACGCGCG TGGCTCGACT GGCTCGCGCC CGCATTCCGC
GAACACGGCG CGACGCCGCC GGCGTCGCTA TCGGAGATCT ATACGAGCTT CGTCGCGGAC
GATGCGATGC TCGCGATGCT GGTCGAAGAA AAACCGGCCG TCGTGAGCTT TCATTTCGGC
TTGCCGTCCG ACGAGGCAAT CGCGATGTTG AAGCGCGCGG GCGTCACGCT GTTCGCGACC
GCGACGAATC CCGACGAAGC CCGGCAGATC GCCGCGGCCG GCATCGATGC GATCGTCGCA
CAGGGCATCG AGGCCGGCGG GCACCGTGGC GTGTTCGACT CGACGGCGCA CGACGATCGG
CTCGGCACGT TCGCGCTCAC GCGCCTGATC GTGCGCGAAT GCGCGCTGCC CGTGATCGCC
GCCGGCGGCA TCATGGACGG CGACGGCATC GCCGCGGCGC TCGCGCTCGG CGCGCAGGCC
GCGCAGCTCG GCACCGCCTT CGTCGCGTGC CCGGAGACAT CGATCGACGA CGGCTATCGC
CGCGCGATCC TCGGCGACGC GGCGCGCCGC ACGACGTTCA CGAGCGCGAT CTCCGGCCGG
CTCGCGCGCG GCATCGCGAA CCGGCTGACC GTGCTCGGCG ACGATCCGCG CGCACCGGCC
ACGCCGGCCT ATCCGATCGC GTACGACGCC GGCAAGGCAC TGCATGCGGC CGCGAAGGCA
ACAGGCGAAT TCGGCTACGG TGCGCAGTGG GCCGGGCAGG CGGCGCCCCT CGTCCGGTCG
CTGCCCGCGG CCGAACTGTT CGCGACGCTC GAGCGCGAGA CACGAGCGGC CATCGCGCGG
TTGCAGCACG TGCTGGACTG A
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| Protein sequence | MIPSTDNRTL LRTLGIRTPI IQAPMAGVST PALAAAVSNA GGLGSLGVGA TNADGARKMI
RDTRALTDRP LNINLFCHQP ARADAAVERA WLDWLAPAFR EHGATPPASL SEIYTSFVAD
DAMLAMLVEE KPAVVSFHFG LPSDEAIAML KRAGVTLFAT ATNPDEARQI AAAGIDAIVA
QGIEAGGHRG VFDSTAHDDR LGTFALTRLI VRECALPVIA AGGIMDGDGI AAALALGAQA
AQLGTAFVAC PETSIDDGYR RAILGDAARR TTFTSAISGR LARGIANRLT VLGDDPRAPA
TPAYPIAYDA GKALHAAAKA TGEFGYGAQW AGQAAPLVRS LPAAELFATL ERETRAAIAR
LQHVLD
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