Gene BamMC406_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1624 
Symbol 
ID6176407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1824005 
End bp1824832 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID641681385 
Productesterase/lipase-like protein 
Protein accessionYP_001808327 
Protein GI172060675 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0914891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.766915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC TCTATCGCGG CATGGACCGC GCGGCGCTCG ACGCCGCCTA CCTCAACACG 
AAGGCCGTTG CCGATTTCCC GGCCGTGCTC GCATCGTGCC AGGCACGCAG CAGGGCGCTT
TACGACGCGA CGCCCGGGCA GCGCGACCTG CGTTACGGCG AGCGCCCCGC GCAGCGCTTC
GACTGGCTGC GCTGCGGCCG GCCCGACGCG CCGCTGTTCG TGTTCATTCA CGGCGGCTAC
TGGCAGCACT GCGCGAAAGA GGATTTCGCG TACGCGGCCG CCGGGCCGCT CGCGCGCGGC
TTCGACGTCG TGCTCGCTGA ATACACGCTT GCCCCGGCCG CATCGATGAC CGACATCGTT
GGCGAGATCG GCGCGTTGCT CGACTACCTG TCGACCGATC CCGACGGCAT CGGCACCGCA
CGGCGGCCGA TCCACCTGAG CGGTCATTCG GCGGGCGGCC ACCTGACGGC CGTGCATCGC
GCACATCCGG CCGTCGTGTC GGCGCTCGCG ATCAGCCCGC TCGTCGATCT CGAACCGATC
TCGCTGTGCG TGCTTAACGA CAGACTGCAG CTCACCGCGC GCGAAATCGC CGCGTACAGC
CCGCTGCATC ATATCGGGCC CGGCGCGCCG ACCGTCGTCG CGGTCGGCGC GGCCGAGTTG
CCGGAACTCG TGCGCCAGGC CCACGAATAC GCGGACGCAT GCGAGGCGGC CGGCGAGCGG
ACCGCGCGCG CGTGGGTGCC CGGCATGCAG CATTTCACGG TGCTGGACGA CCTCGCGACG
CCCGACAGCA CGATGCTCGC AGCGTTGCAG GCGATCGCGC CGCGCTGA
 
Protein sequence
MTILYRGMDR AALDAAYLNT KAVADFPAVL ASCQARSRAL YDATPGQRDL RYGERPAQRF 
DWLRCGRPDA PLFVFIHGGY WQHCAKEDFA YAAAGPLARG FDVVLAEYTL APAASMTDIV
GEIGALLDYL STDPDGIGTA RRPIHLSGHS AGGHLTAVHR AHPAVVSALA ISPLVDLEPI
SLCVLNDRLQ LTAREIAAYS PLHHIGPGAP TVVAVGAAEL PELVRQAHEY ADACEAAGER
TARAWVPGMQ HFTVLDDLAT PDSTMLAALQ AIAPR