| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1619 |
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| Symbol | |
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| ID | 6177430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1819940 |
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| End bp | 1820914 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681380 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001808322 |
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| Protein GI | 172060670 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.967431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCT GTTCCTCTCC CGCGAAGATC GTGTTTCTGG ACCGCGCGAC GCTGTCGCCG
CGGACCGTGC TGAAGCCCTT CCCGTTTCCG CACGGCCTCC AGACCTTCGA ACGGACGGCC
GCGCACGAAG TGGCCGCGCG TATCGGCGAC GCGGACGTCG TCGTGACCAA CAAGGTCCGG
CTCGACGCGG TGGTGCTCGG CGATGCGCCG CGTGTGCGGA TGATCGCGAT TGCCGCGACG
GGCACCGACA TCGTCGATCT CGATGCGTGC ACGGCGCGCG GCATCGTCGT CAGCAACATT
CGGGAATATG CGGCGCGCAC GGTGCCGGAG CACACGTTCG CGCTGATCTT CGCGCTGCGG
CGCAGCCTCG TCGCGTATCG CGACGCGGTG CGCGCGGGAC GCTGGCTCGA CAGCGGACAG
TTCTGCTTCT TCGATCATCC GATCCGCGAC CTGGCCGGCG CGACGCTCGG CATCGTCGGC
GCCGGCGTGC TCGGCCGAGC GGTGGCCGCC CTCGCCCGCG CGCTCGGCAT GCGCGTGCTG
TTCGCCGCGC ACGGCGACGC CCGGGGCGAC GACCATGTGC CGCTCGACAC GCTGCTGCGC
GACAGCGACG TGATCACGCT GCACTGCCCG CTCACGCCGG CGACGCGGAA CCTGATCGAC
GCGGCCGCCT TCGCGCGGAT GGCACGCCGG CCGCTGCTGA TCAACACCGC GCGCGGCGGT
CTCGTGGATG AACGCGCGCT CGTCGACGCG CTGCAGTCGG GGCAGATCGC GGGCGCCGGC
TTCGACGTGC TCACGCAGGA GCCGCTGCCG GCCGCGCATC CGTTCCACGC GATCCTGTCG
CATCCGGCGT TCATCCTGAC GCCGCATGTC GCGTGGGCGA GCGACGAGGC GATGCAGGCG
CTGGCCGATC AGCTCGTCGA CAACGTCGCG GCGTTTGCGC GCGGCGAGCC GCGGCATGTG
GTGACGGCGG GGTGA
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| Protein sequence | MFSCSSPAKI VFLDRATLSP RTVLKPFPFP HGLQTFERTA AHEVAARIGD ADVVVTNKVR
LDAVVLGDAP RVRMIAIAAT GTDIVDLDAC TARGIVVSNI REYAARTVPE HTFALIFALR
RSLVAYRDAV RAGRWLDSGQ FCFFDHPIRD LAGATLGIVG AGVLGRAVAA LARALGMRVL
FAAHGDARGD DHVPLDTLLR DSDVITLHCP LTPATRNLID AAAFARMARR PLLINTARGG
LVDERALVDA LQSGQIAGAG FDVLTQEPLP AAHPFHAILS HPAFILTPHV AWASDEAMQA
LADQLVDNVA AFARGEPRHV VTAG
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