| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1609 |
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| Symbol | |
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| ID | 6176510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1805400 |
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| End bp | 1806566 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681370 |
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| Product | ABC transporter, periplasmic ligand binding protein |
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| Protein accession | YP_001808312 |
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| Protein GI | 172060660 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.154443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCA CCACGATCGC GCGCCGGGTC CGCCGGATCA CCCTGGCGCT GGGCCTGACG
CTGTCGGCCG CGGCCGCCGT CGCGGCCCCA GTGTCGCTGA ATGTCGTCGA CGTCGCGGGC
AACCTGCAGC TCACGCGGGG GGCCATCGAG GCGTTCAGGG AGAAGAACCC GAATCTCGTA
TCGAACGTCA CGTTCACGAA CGCGCCCGCG CCGCAACTGC CGGGCAAGAT CAAGGCGATG
CAGGCGGCGG GGCGCTCCGA CATCGACCTC GTGCTGACGG GCACCGACGC GCTCGCCGCC
GGCATCGAGC AGAACCTGTG GATGAAGCTG CTGCCCGACA ACGCGGGCGC CTTCCCCGGC
GTGCTCGACA AGTACGCGCC CGGCCCGCGC AAGATGCAGG ATGTCGCGCA GGGTTTCGGC
CTCGAAGTCA CCTACATGCC GGCCGGCCCG CTGCTCGAAT ACAACCCGGC GAAGGTCAGC
GATCCGCCGA AGACGCCCGC CCAACTGCTC GCGTGGTGCA AGGCGCATCC GAACAAGCTG
ATCTACGCGC GCCCGGCGAA CTCGGGCCCC GGCCGCACGT TCCTGATGGG GCTGCCGTAC
GTGCTGGGCG ACAAGAACCC GCAGGATCCG ATCAACGGCT GGGACAAGAC CTGGGCATTC
CTCAAGCAGC TCAACGACTG CATCCCGTAT TACCCGGGCG GCACGTCGGC CGTGATGAAG
GAGCTCGGCG AGGGCACGCG CGACATGACC GTGACCGTCA CCGGCTGGGA CCTCAACCCG
CGCGCGCTCG GCATCGTGCC GGCCGACTTC CGGATCCAGG CGTTCGACGG GATGACGTGG
GTCAACGACG CGCACTACAT GGTGATCCCG AAGGGCGTGC CGAAGGACAA GCTCGACGTG
CTGTTCAAGC TGATGAACTT CCTGCTCGAA CCGGCCCAGC AGGCGATGAC CTACGACGAC
GGCTACTTCT ATCCGGGCCC GGCGGTGAAG GGCGTGACGC TCGAGATGGC GCCCGCGCAC
AGCCAGGAGG TGATCAGGAA GTTCGGCCGC CCCGAGTACG CGAAGCTGCT CGCGGAACGT
CCGCACGTGC AGCCGCTCAG TGCGCAGGCG ATGGTCGCCG CGTTCCAGAA GTGGGACCGC
GAGATCGGTT CGCAGAAGTC GAAATGA
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| Protein sequence | MNTTTIARRV RRITLALGLT LSAAAAVAAP VSLNVVDVAG NLQLTRGAIE AFREKNPNLV
SNVTFTNAPA PQLPGKIKAM QAAGRSDIDL VLTGTDALAA GIEQNLWMKL LPDNAGAFPG
VLDKYAPGPR KMQDVAQGFG LEVTYMPAGP LLEYNPAKVS DPPKTPAQLL AWCKAHPNKL
IYARPANSGP GRTFLMGLPY VLGDKNPQDP INGWDKTWAF LKQLNDCIPY YPGGTSAVMK
ELGEGTRDMT VTVTGWDLNP RALGIVPADF RIQAFDGMTW VNDAHYMVIP KGVPKDKLDV
LFKLMNFLLE PAQQAMTYDD GYFYPGPAVK GVTLEMAPAH SQEVIRKFGR PEYAKLLAER
PHVQPLSAQA MVAAFQKWDR EIGSQKSK
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