| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1602 |
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| Symbol | |
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| ID | 6178107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1796009 |
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| End bp | 1798702 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641681363 |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_001808305 |
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| Protein GI | 172060653 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.208535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCACC CACCCGATCG CGCCGATGCG CCCCCCACCG AACTCGTGCT GAAGACGACC
GCGCCGCGCG TGCCGGCGCA GTTACTCGCG CGTGCGCGGC TGAGCCTCGC CGCGCCGGCG
TTCGACGCCC GGCCCGTGAT GCTCGTGCAG GCGCCGGCCG GCTACGGCAA GACGTCGCTG
CTCGCGCAAT GGCGGCGCGA ATCGCTCGCG CTTGGCCGCG CGGTCGTATG GCTGTCCGCC
GACGAGCGCG ACGACGCGCC GCGCCTGCTG CAGGGGCTCG TGCAGGCGGT GCGCACGGGT
TGCGCGCGGC CCGGCTTCGG GCGCTTGATC GCGGGCGGCG CGGCGCGCGC GCTGGAGGGG
CTCACCGCGT GGCTCGCCGA AGTCGCGCAA CTGTCGATCG ACGCGCTGCT GATCGTCGAC
GACGCGGAGC GGCTGCCGGC CGCCGGCCTC GACGCGCTGA CCTATGTGCT GCACAACGCG
CCGCAGAACC TGCGCGTGAT CGTCGCGGGC CGGCGCGGGC TCGATCGCGC GGCCGGCGAC
CTGCTCGCCG GCGGGCAATG CACGCTCGCG GGGCCCGAGT GGCTGCGCTT CACGCTCGAC
GAGACGATCG CGCTGGTCGG TGCGCGCTTC GCGCAGCGGG TCGACGCCGA TGCGTGCGCG
CGGCTGTTCG AGCGCGTCGA CGGCTGGCCG CTCGGGCTGC AGCTCGCGAT GGCCGCGATG
GCGCGCTCGG CCGATCCGCG CCAGGCCGTC GACGCGCTCG CCGCGCGCAT GGACGGCACT
CGCGACCGGC TCGTCGAGCT GCTGCTCGCG AACCTGTCCG CCGATGACAC CGCGTTCCTG
ACGCGCACGA GCATCGCCGA CCGCCTGCAT CCGTCGCTGT GCGCGGCGCT GCTCGACGAC
GCGGAGGCGC CCGACCGGCT CGCGCGGCTC GCGCGCGATA CGCCGCTGTT CATCGCGTCG
GATGACTCCG ACTGGTGCCG GCTGCATCCG CTCGTGCGCG ATACGCTGCG CGACCGCCTG
GCGGCGGGCC CGGCCGCGGA GCGCGGCGCG CTGCATGGCC GCGCGGCCGC GTGGCTCGAT
GCGCACGGGA TGACGGAGGA AGCCGCGCGT CATGCGTATG CGGCCGGCCA GGTCGAGACC
GCGTACGCAC TTGCGCAGCG CTGCCTCGAG GATGCGATCA AGCAGGGCCG AATCAACGAC
GTGCTCGACT GGCTCGCGCT GCTGCCCGAT GCGGAACTCG ACAAGCGTCC GACGCTGCGG
ATCGCGGTCG CGTGGGCGCT GGCGCTGGGC GAGCGCCATG TGGAGGCGCA GCGCCAGATC
GCCGGCATCC TCGCCGACGC AGGCACACCG GCCGCGATGC GCTACGAATG TGCGCTGATC
CTCAGCGCGG CGGCCTATTA CGCGGACGAA ATCGACCGTT TCGTCGAGCT GTTCGAGCCG
TGGGCCGACT TCACGCCGCC CGCGGCCACG TGGCTCGCGC AGATGCACGC GAACCGCCTG
TCGGCGCGCG CGATCATCGT CGGCGAACCG GCGCAGGCAC GCCGCTACCA GCAAGCCGCG
CCGCGCGGCG GCACCGCTGC CGGGTTCGGC TACGTTGCAC GCTGGGGCGA GCTGATCACC
GGCCTGAGCT ACCTGTGCGA AGGCCAGATC CGGCTCGCCG ACGACGCATT GTCGCCGGCC
CTCGCGCGCG CGGAAGCCGA CCTCGGGCGC CGCCATCCGC TGACCTGCAT GTTGGCGGCG
ATGTGCGCGG CGATCGCCTA CGAGGCCGAT CGCGTCGACC AGGCCGCCGC GCTGCTCGCG
AACCGGCTCG ACGTGCTCGA GCACGCGGGC ACGCCCGACA CCGTGCTGCT CGGCTATCGG
ACGGCCGCGC GCATCGCGCT GCTGCGCGGC GTCGAGCATC GCGCGATCGA CCTGCTCGAG
GCGCTCGACG CGCTGGGCGT CGCGCGCCGG CTGCCGCGGC TGTCGGTGGC GAGTCTCGCC
GAGCAGGTGC GCATTCACGC GGCGCGCTAT CGCGAGGCGA CCTGCCATGC GCTCGTCGAG
CGGATCGATG CGATCGCCGC GGCCGAGTTT CCGTCGCATG GCCCGCTGTG GCGGCGCCCC
GTCGTGCTGC TGCAGGCGAT CGCGCATGCG GGCGCCGCGC TTGCCGCGCG CCGCTGGGAC
GATGCGTGCG CTGCACTCGA CGAAGCGGCC GTGCTGGCCC GGGAGATGAG CCTCGGGGGC
GCGCGCATCG AGATCATGGC GCTCGGCGCG TTCGCGCTCG AACAGTCGGG GCACGACGGC
CGCGCGCGGC TCGACGAGGC GATGAACCTC GCGGACATGT TCGGCCTCAC GCGCACGCTC
GCCGATACGC ATCCGGCCGT CGCCGACTGG GCGCGCCGCA TCGGCGACGA GGCGATCGAG
CGCGATGCTC CGGCAAGGTC CGCGCAACCG CAGCCGCGCA TCGTGCCGCC CGCGCCGCGC
AGCACGGCCA GCCCGCGTGC GGTGCCGAGC GTCGTGCTGA CGCCCAAGGA GCGCGCGATT
CTCGAGCTGC TCGCGCGCAG CCTGTCGAAC AAGGAGATCG CGGTGGCGCT CGCCGTCGGC
GAGGAAACCG TGAAGTGGCA CCTGAAAAAC CTGTTCGGCA AGCTCGACGC CAGTTCACGC
AAGCACGTCG TGCGCCGCGC GCTGGTGCTC GGGTTGCTCG AAAGCGCGCC TTGA
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| Protein sequence | MAHPPDRADA PPTELVLKTT APRVPAQLLA RARLSLAAPA FDARPVMLVQ APAGYGKTSL
LAQWRRESLA LGRAVVWLSA DERDDAPRLL QGLVQAVRTG CARPGFGRLI AGGAARALEG
LTAWLAEVAQ LSIDALLIVD DAERLPAAGL DALTYVLHNA PQNLRVIVAG RRGLDRAAGD
LLAGGQCTLA GPEWLRFTLD ETIALVGARF AQRVDADACA RLFERVDGWP LGLQLAMAAM
ARSADPRQAV DALAARMDGT RDRLVELLLA NLSADDTAFL TRTSIADRLH PSLCAALLDD
AEAPDRLARL ARDTPLFIAS DDSDWCRLHP LVRDTLRDRL AAGPAAERGA LHGRAAAWLD
AHGMTEEAAR HAYAAGQVET AYALAQRCLE DAIKQGRIND VLDWLALLPD AELDKRPTLR
IAVAWALALG ERHVEAQRQI AGILADAGTP AAMRYECALI LSAAAYYADE IDRFVELFEP
WADFTPPAAT WLAQMHANRL SARAIIVGEP AQARRYQQAA PRGGTAAGFG YVARWGELIT
GLSYLCEGQI RLADDALSPA LARAEADLGR RHPLTCMLAA MCAAIAYEAD RVDQAAALLA
NRLDVLEHAG TPDTVLLGYR TAARIALLRG VEHRAIDLLE ALDALGVARR LPRLSVASLA
EQVRIHAARY REATCHALVE RIDAIAAAEF PSHGPLWRRP VVLLQAIAHA GAALAARRWD
DACAALDEAA VLAREMSLGG ARIEIMALGA FALEQSGHDG RARLDEAMNL ADMFGLTRTL
ADTHPAVADW ARRIGDEAIE RDAPARSAQP QPRIVPPAPR STASPRAVPS VVLTPKERAI
LELLARSLSN KEIAVALAVG EETVKWHLKN LFGKLDASSR KHVVRRALVL GLLESAP
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