| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1597 |
|---|
| Symbol | |
|---|
| ID | 6177849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1790876 |
|---|
| End bp | 1792072 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641681358 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001808300 |
|---|
| Protein GI | 172060648 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2807] Cyanate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.327647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCT GCATTTCCCC CGGCTGGCGG CTTGCCGCCA TCGTGCTGGT CGGACTGAAC
CTGCGGCCGG CGCTGGCCGC GATCGGTCCG CTGCTCGACA TGATCCAGCG CGCGACAGGC
ATCGGCGACG GCGCGGCGAG CCTGCTGACC ACGATCCCGA TCCTGCTGAT GGGCGTGGGC
GCGCTGAGCG CGCGGCGGCT GCAACGCGTG ACGGGGATCG CGGGCGGCGT GTGGCTCGGC
GTCGTGCTGA TCGGGTTCGC GTGCGCGTCG CGCATTGGTG CGCAGCATGC GTGGGTGCTG
CTGGCAAGCG CATGCTGCGC GGGCATCGGG ATCGCCATGG TGCAGGCGTT GCTGCCAGGG
TTCGTGAAGG CGCATTTCGC GACGCGGATC GGCGGCGCGA TGGGCGTCTA TTCGACGTCG
ATCATGGGCG GCGCGGTGCT CGCGAGCGTC GTCGCGCCGT TCGCCGCGGC CCGCTGGGGC
TGGCTCGCCG CGCTCGCGGG CTGGGCGCTG CCGGCCGGCC TTGCAGCGCT CGCGTGGCCG
CTGGCCAGTC GTGACGGCGA CGCGCCGGCG TCCGGAGCGC TGCCGGCGTC GGCCGCGACA
TCGATGGCGC ATGCGCGACC GGCGCGCTCG CCGCGCGCAT GGCGGCTCGC GGTGTTCTTC
GGGATCGCGA CGGGTGCCTA CACGCTCGTG CTGGCGTGGC TGCCGCCGTA CTACATGCGG
CTCGGCTGGT CGCCGACCGC GGCCGGCGGC CTGCTGGGCG GCGTGACGCT CGCGGAAGTC
GTCGCGGGGC TGACGATCTC CGCGATGATC GACCGCCTGC CCGATCGCCG GCCAGCGCTG
CACGCGGCGA TCGCGTCGCT GCTGGCCGGG CTGCTGGTGA TGCTGGCCGC GCCGCAGGCG
CTCGCGTTGC CGGCCGCGCT GCTGCTGGGT GCGGGCATCG GCGCGCTGTT TCCGCTGTCG
CTGATCGTCA CGGTCGATCA TGCGGCGACG CCGGCCGATG CCGCATCGTT GACGGGGTTC
GTGCAGGGCG TCGGCTATCT GGTCGCGGGG CTGTTTCCGT TCGCGGCGGG CATCGTGCGC
CAGCGTCTCG CGGATCTGTC GCCCGCGTGG GTCGCGATGG CTTGCCTGTG TGTCGTGCTG
TTCGCGCTGG CGGCGGGTTT CGCGCCGCAG TTTGCGCGGC GCGTCGCGCG TGCGTAG
|
|---|
| Protein sequence | MNRCISPGWR LAAIVLVGLN LRPALAAIGP LLDMIQRATG IGDGAASLLT TIPILLMGVG
ALSARRLQRV TGIAGGVWLG VVLIGFACAS RIGAQHAWVL LASACCAGIG IAMVQALLPG
FVKAHFATRI GGAMGVYSTS IMGGAVLASV VAPFAAARWG WLAALAGWAL PAGLAALAWP
LASRDGDAPA SGALPASAAT SMAHARPARS PRAWRLAVFF GIATGAYTLV LAWLPPYYMR
LGWSPTAAGG LLGGVTLAEV VAGLTISAMI DRLPDRRPAL HAAIASLLAG LLVMLAAPQA
LALPAALLLG AGIGALFPLS LIVTVDHAAT PADAASLTGF VQGVGYLVAG LFPFAAGIVR
QRLADLSPAW VAMACLCVVL FALAAGFAPQ FARRVARA
|
|---|
| |