| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1591 |
|---|
| Symbol | cobH |
|---|
| ID | 6178421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1784514 |
|---|
| End bp | 1785140 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641681352 |
|---|
| Product | precorrin-8X methylmutase |
|---|
| Protein accession | YP_001808294 |
|---|
| Protein GI | 172060642 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2082] Precorrin isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.257981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGACT ACATTCGCGA CGGGCAGGAA ATCTACCGCC AGTCGTTCGC GACGATCCGC
GCCGAGGCCG ACCTGTCGCA GGTTCCGCCC GATCTCGAGA AGCTCGCGGT GCGCGTGATC
CACGCGTGCG GGATGGTCGA TGTCGTCTAC GACCTGCGCT TCTCGGCCGG CGCCGGCACC
GCGGGCCGCA CGGCGCTCGC GGCCGGCGCG CCGATCCTGT GCGACGCGCG GATGGTCGCC
GAAGGCATCA CGCGCGCGCG GCTGCCGGCC GGCAATCGCG TGATCTGCAC ACTCGGCGAA
CCGGAGGTGC CCGACCTCGC GCGGCATCTC GGCAACACGC GTTCGGCCGC GGCGCTCGAG
CTGTGGCGCC CGCATCTGGC CGGCAGCGTC GTCGTGATCG GCAATGCGCC GACCGCGCTG
TTCCACCTGC TCGACATGAT CGACGCCGGC GCGCCGCGCC CCGCGCTGAT CCTCGGCTTC
CCGGTCGGCT TCATCGGCGC GGCCGAATCG AAGGCGATGC TCGACGCCGA GAGCCGCGGC
GTGCCCTACG TCACGCTGCT CGGCCGGCGC GGCGGCAGCG CGATGGCCGC CGCCGCCGTC
AACGCACTCG CGACGGAGGC CGAATGA
|
|---|
| Protein sequence | MLDYIRDGQE IYRQSFATIR AEADLSQVPP DLEKLAVRVI HACGMVDVVY DLRFSAGAGT
AGRTALAAGA PILCDARMVA EGITRARLPA GNRVICTLGE PEVPDLARHL GNTRSAAALE
LWRPHLAGSV VVIGNAPTAL FHLLDMIDAG APRPALILGF PVGFIGAAES KAMLDAESRG
VPYVTLLGRR GGSAMAAAAV NALATEAE
|
|---|
| |