| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1584 |
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| Symbol | |
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| ID | 6178117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1775599 |
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| End bp | 1776765 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681345 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001808287 |
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| Protein GI | 172060635 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.554978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.354425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGC TGGAGCAGCA GGGCGCGTTG GCGGGGTTGC GCATCATCGA TCTGTCGCGG
GTGCTGGGCG GCCCGTACGC GACCCAGATT CTCGCCGACC ACGGCGCGGA GGTGATCAAG
GTCGAACCGC CGTCGGGCGA CGAGACGCGC ACCTGGGGGC CGCCGTTCGA TGGCGACACC
GCGTCGTATT TCCTCGGCGT GAACCGCAAC AAGCTCGGCA TCGCGCTTGA CCTGACGAAG
CCGGACGATC GCGAGAGGCT GCTCAGGCTG CTCGAGCACG CGGACGCGCT GGTCGAGAAC
TTCAAGATCG GCACGATGGA ACGCTGGGGG CTCGGCTTCG ACGCGCTGCA TGCGCGCTTT
CCGCGGCTTG TTTATTGCCG CGTGTCGGGC TTCGGCGCGG ACGGCCCGCT CGGCGGGCTG
CCCGGCTACG ACGCGGCCGT GCAGGCGCTG GCCGGCTTGA TGAGCGTGAA CGGCGAAGCG
GGCGGCGCGC CGCTGCGCGT GGGCGTGCCG ATCGTCGATC TCGTCACCGG GCTGAACGCG
GCGCTCGGCG TGCTGATGGC GCTGCGCGAA CGCGATGCGA GCGGGCGCGG CCAGTTCGTC
GAATCGACGC TGTTCGACTG CGCGCTGTCG ATCCTGCATC CGCACACGCC GAATTTCTTC
CACTCCGGGA AGGCGCCGGT GCGCACCGGC AACGCGCATC CGAACATCAC GCCGTACGAC
AGCTTTCCGA CCGCGAGCGT CGACATCTTT CTCGCGGTCG GCAACAACGG ACAGTTCGCC
GCGCTGTGCG ACGTGCTCGG CACGCGCGAC TGGCCCGACG ACCCGCGCTT CGCCGACAAC
CGCGCGCGCA GCGCGAACCG CGCCGCATTG CGCACGCTGC TCGAAACGGC GCTGGCCGCA
CACGACGGCG CGGCGCTCGC CGAGCAGCTG ATGCGCCGTG GCGTGCCATG CGCGCCCGTG
CTCGGGCTGG ACGCGGCGCT CGACCATCCG CACGTCGCGC ATCGGCAGAT GAAGGTCGAA
CTGGGGCGGC ACCGCGGCAT CGCGTCGCCG ATCAAGCTCG GCCGCACGCC GGCCTCGTAC
CGGCGGCCGC CGCCCGCGCT GAACGAACAC GCGGCGCAGG TGTTTGCCGA CGCGCCACGA
GACGACAACG GCAAGCAAGG CAACTGA
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| Protein sequence | MAELEQQGAL AGLRIIDLSR VLGGPYATQI LADHGAEVIK VEPPSGDETR TWGPPFDGDT
ASYFLGVNRN KLGIALDLTK PDDRERLLRL LEHADALVEN FKIGTMERWG LGFDALHARF
PRLVYCRVSG FGADGPLGGL PGYDAAVQAL AGLMSVNGEA GGAPLRVGVP IVDLVTGLNA
ALGVLMALRE RDASGRGQFV ESTLFDCALS ILHPHTPNFF HSGKAPVRTG NAHPNITPYD
SFPTASVDIF LAVGNNGQFA ALCDVLGTRD WPDDPRFADN RARSANRAAL RTLLETALAA
HDGAALAEQL MRRGVPCAPV LGLDAALDHP HVAHRQMKVE LGRHRGIASP IKLGRTPASY
RRPPPALNEH AAQVFADAPR DDNGKQGN
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