Gene BamMC406_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1578 
Symbol 
ID6176131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp1772196 
End bp1772804 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content74% 
IMG OID641681339 
ProductMg-chelatase subunit ChlD-like protein 
Protein accessionYP_001808281 
Protein GI172060629 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.302064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGGGA CGGCACGCGC CGGCACGGCC GTGGCGTGGC CGGCGACGCT TGCCGCGAAG 
CGCGGCGGCC CGCTGCACGC CGGCCATCTG CGTTTTCGCA AACAGGCCGG CGCCCCGCGC 
GCGCTCCATT GCTTCGTGCT CGACTGTTCG GCGTCGATGT TGTCGGACGA ACGACTCGCG 
CTCGCGAAAG GGTTGATCGT CGCGTACTTC GACCAGGCCG CGCGCGACCG TGTGGAAACC 
GCACTGATCT GCTTCGGCGG CAACGGCGCC GCGCGGCGTT TCGGCCCAGC CGTGCCGCGC 
TGGTGGAACG CGCGCTGGCT CGAGCCGGTG GATGGCGGCG GCGGCACGCC GCTCGCGGAC 
GGCATCGCGG CCGCCGCGCA ATTGCTCGCG CGCGCCGCAC GGCGTACGCC GGACCAGCAG 
CGCTGGCTGT GGGTGCTGTC CGACGGACGC ACGCGCGAAA CGGCACCGAA ACCGGCGGCC 
GCCGATCACG TCGTGTTCGT CGATTTCGAT GACACGGCCG TGCGGATCGG GCAGGGCAGG 
CGGCTCGCCG ACGCATGGGG CGCGCAATGG GCGACGGCCG CGTCGCTGTG CGCCGGGCTG 
ACCGGCTGA
 
Protein sequence
MPGTARAGTA VAWPATLAAK RGGPLHAGHL RFRKQAGAPR ALHCFVLDCS ASMLSDERLA 
LAKGLIVAYF DQAARDRVET ALICFGGNGA ARRFGPAVPR WWNARWLEPV DGGGGTPLAD 
GIAAAAQLLA RAARRTPDQQ RWLWVLSDGR TRETAPKPAA ADHVVFVDFD DTAVRIGQGR 
RLADAWGAQW ATAASLCAGL TG