| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1576 |
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| Symbol | cobN |
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| ID | 6175944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1767236 |
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| End bp | 1771048 |
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| Gene Length | 3813 bp |
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| Protein Length | 1270 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681337 |
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| Product | cobaltochelatase subunit CobN |
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| Protein accession | YP_001808279 |
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| Protein GI | 172060627 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.104948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.435931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTGC TGCGCACCAC GCCGGGCGGC TTCGTCGACG ATACGCAGGG CGTCGTCCGG
ATCGACCAGC AGCCGGCCGA CATCGTGATC CTGAGTTCGG CCGATACGAC CTTGTCGCTG
CTGGCGAGCG TCGTGCCGAA GCTGCCGGCC GGCTTTCCGA GCGTGCGGCT CGCGAACGTC
ACGTTCCTGC GGCAGCCGGC GTCGGTCGAT TTCTATGTCG ACGACGTGCT GCGTCATGCG
AAGACGGTCG TGATCGATCA TCTCGGCGGC GAAGCGTACT GGCCGTACGG GATCGAACAG
GCCGTGTCGC TCGCGTCCAA GCGCCGGCAG CAGCTCGCGA TGTTCTCGGG CGACCTGCAG
GAAGACCCGA ACCTTGTTGC GAAGAGCACG GTCGCGCCGG CGCTGTGCCG GCTGTGGTGG
CGGTACCTGC GCGACGGCGG GATGCACAAC GCCGAAGCGC TGCTGCGCAG CATCGCATTC
CATACGCTCG GCTTCGGCGA CGAACCCGAG CCGCCGCGCC CGCTGCCGGC CGCCGCGCTG
TATCACCCGG CGCGCGACCC GGCGAGCGTC GACGACTGGC GCGCGCGCTG GACGCCCGGC
GCACCCGTGG TCGCGATCCT GTTCTATCGC GCGCACTGGC AGGCCGCGAA CACGGCCGTG
TTCGACGCGC TGGCCGATGC GCTCGTGCGC GAAGGGCTCA ATCCGCTGCC GATCGCGGTC
ACGTCGCTGA AGGACGCGGT GAGCCGCGAG GTCATCACGC AGCTCTGCGA CACGCACGAC
GTCGCGCTCG TGCTGAACAC CACGGCCTTC GCGGCCGGCG CGATCGACAG CCCCGAGCCC
GACGTGCTCG CCGGCGACGC GCCGGTGCTG CAGGTGATCC TGTCCGGCGG CAACCGCGAC
GCATGGGTGG CCGACAACCA GGGGCTGCAC GCGCGCGACA TCGCGATGCA CATCGCATTG
CCTGAAGTCG ACGGGCGCAT CGTCACGCGC GCGGTGAGCT TCAAGGGGCT CGCGTATCGG
TGTCCGCACA CCGAAGTCGA CGTCGTGCGC TACCAGCCGG ATGCCGAACG CATCGCGTTC
GTCGCGGCGC TCGCGCGCGG CTGGTGCCGG CTGCGCACGC TCGACAACGC CGACAAGCGC
ATCGCGCTGA TTCTCGCGAA CTATCCGCAA AGCGAAGGGC GGATCGGCAA CGGCGTCGGG
CTCGATACGC CGGCGTCCGC GCTGCGCGTG CTCGCGGCGC TGCGCGACGC GGGCTATGCG
GTGGCCGACC TGCCGGCCGA CGGCGACGCG CTGATCGCGC GGCTCACCGA AGGCGTGACC
AACGACCCGG CCGTGCGCGC ACTGCGCCCC GCGTTCCAGA GTTTCGCGCT GGCCGACTAC
GTCGCGCATT TCGCGCGGCT GCCGGCCGCC GTGCGCGATG CGCTGAACGA GCGCTGGGGG
CCGCCCGACG CGGACCCGAC GCTGCGCCAG GGGCGCTTTC CGATCGCCGG CTGGCGCGCG
GGCAACGTGT TCGTCGGCAT CCAGCCGTCG CGTTCGCGCG GCGAGAACGA CTATGCGAGC
TACCACGACG CGGACCTCGT GCCGCCGCAC GCGTATCTCG CTTTCTATTT CTGGCTGCGC
GATGCGTTCG GCATCGACGC GGTCATCCAC CTTGGCAAGC ACGGCAACCT CGAATGGCTG
CCGGGCAAGA GCGTCGCGCT GTCCGACGCG TGCTGGCCGG ACCTGACGCT CGGGCCGCTG
CCGCATCTGT ATCCGTTCAT CGTCAACGAT CCGGGCGAGG GCAGCCAGGC GAAGCGCCGC
GCGCAGGCCG TGATCATCGA TCACCTAATG CCGCCGCTCA CGCGCGCGGA AAACTACGGC
CCGCTGCAGG ATCTCGAACG GCAGGTCGAC GAATACTACG AAGCGCTGAT GGTCGATGCG
CGGCGCGCGA AGCTGCTGCG CAAGACGATC CTCGCGACGA TCGCCGAACA CCGGCTGCAT
GACGAGCTGA GCGTGTCGCC GCCGCGCGAC GCCGGCGACG AGGACGCGCT GCTCACGCGC
GTCGATGCCT GGCTGTGCGA ATTGAAGGAA GCGCAGATTC GCGACGGGCT GCACGTGTTC
GGCGCGTCGC CGATCGACCG TCAGCGGCGC GATACGTTGC TCGCGCTCGC ACGCTTTCCG
GTCGGCGACG GCAAGGGCGA ACGCGCGGGG CTGATCGCCG CGCTCGCGCG CGATCTCGCG
CTCGGCGACG ATTTCGATCC GCTCGCGGCC GACTGGGCCG CGCCGTGGAC GGGCTCGCGG
CCGGCCGTGC TGCAGGCGCT CGACGCGTCG CCGTGGCGCC ATGCGGGCGA CACGCGCGAG
CGGCTCGAGC GGCTCGCGCA GCGGTGGCTC GATGGACTGT GCCGTGCGAA TGTCGGCGGC
GACGCCGGCA TCGAGGCGAC GCCGCCGGGG GCATGGACGC ACACGCTCGC CGTGCTCGAA
CGCGTGCGCG CGACGCTGCT GCCCGCGCTC GACGCGTGCG GCGGCGAGGA ACTGCGCCAG
CTGCTGCGCG GGCTCGACGG CCGCTTCGTG CCGCCGGGGC CGAGCGGCTC GCCGTCGCGC
GGCCGTCCCG ACGTGCTGCC GACGGGCCGC AACTTCTATT CGGTCGATAC GCGCGCGGTG
CCGACGCAGG CCGCGTGGTC GCTCGGGCTG AAATCCGCGC AGCAGCTGAT CGAACGTCAT
CTGCAGGATC ACGGCGACTA TCCGCGCGCG ATCGGGCTGT CGGTCTGGGG CACGGCCACG
ATGCGCACCG GCGGCGACGA TATCGCGCAG GCGTTCGCGC TCCTCGGCGT GCGGCCGAAA
TGGGCGCACG GCAGTCATCG CGTGACCGAC TTCGAGATCC TGCCGATCGA GATCTTCGAC
CGGCCGCGCA TCGACGTGAC GCTGCGCGTG TCGGGCTTCT TCCGCGACGC GTTTCCGAAC
CTGATGCACC TGTTCGACGC GGCCGTGCAG GCCGTCGCCG CGCTCGACGA GCCCGAGGCG
CTGAACCCGA TCCGCGCGCG CATCGAGCGC GAACGGGCGA CATGGATCGA GCGGGGCGTG
GCGCCCGACG AAGCGCGACG CCGCGCTGGC TGGCGCGTGT TCGGCGCGCG GCCGGGCAGC
TACGGTGCGG GCCTGCAGGA CATGATCGAC CAGCGCCGCT GGCAGACCGA CGCCGACCTC
GCCGACGCGT ACCGCCAGTG GGGCGGCCAC GCGTACGCGC AGAACAGCGC GGGCGACGCG
GCCCCCGACG TGTTCGGCGA GCGGCTCGCG ACGATCGACG TCGTCGTGCA GAACCAGGAC
AGCCGCGAAC ACGACATCCT CGATTCGAAT GACTACTACC AGTTCCAGGG CGGGATGACG
GCAGCCGTGC GCCACCTGTC CGGCCAGCAG CCGAGCATCT ACCACGGCGA CCATGCGAAT
CCGGTCGCGC CGAAGATGCG CACGCTGCGC GAGGAGATCG CACGCGTGAT CCGCTCGCGC
GTCGTCAACC CGAAATGGCT CGACGGCGTG AAGCGTCACG GCTACAAGGG CGCGGCCGAA
ATGGCCGCGA CCGTCGACTA CCTCTACGGC TATGACGCGA CTGCCCGCGT GCTGTCGGAC
CACCAGTACG CGCTCGTCGC CGACGCGTAC CTGTTCGACG ACGACACGCG CGCGTTCCTC
GAACGACACA ACCCGAAGGC GCTGCACGGC ATCTGCGAAC GCTTCGTCGA AGCGATGCAG
CGCGGGCTGT GGCAGCAGCC GGGCGACTAT CGCGAGCGGA TCGAAGCGGT CTGGCTCGAC
AGCGAACAAC TCCAGGAAGG AGGACGGCGA TGA
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| Protein sequence | MHLLRTTPGG FVDDTQGVVR IDQQPADIVI LSSADTTLSL LASVVPKLPA GFPSVRLANV
TFLRQPASVD FYVDDVLRHA KTVVIDHLGG EAYWPYGIEQ AVSLASKRRQ QLAMFSGDLQ
EDPNLVAKST VAPALCRLWW RYLRDGGMHN AEALLRSIAF HTLGFGDEPE PPRPLPAAAL
YHPARDPASV DDWRARWTPG APVVAILFYR AHWQAANTAV FDALADALVR EGLNPLPIAV
TSLKDAVSRE VITQLCDTHD VALVLNTTAF AAGAIDSPEP DVLAGDAPVL QVILSGGNRD
AWVADNQGLH ARDIAMHIAL PEVDGRIVTR AVSFKGLAYR CPHTEVDVVR YQPDAERIAF
VAALARGWCR LRTLDNADKR IALILANYPQ SEGRIGNGVG LDTPASALRV LAALRDAGYA
VADLPADGDA LIARLTEGVT NDPAVRALRP AFQSFALADY VAHFARLPAA VRDALNERWG
PPDADPTLRQ GRFPIAGWRA GNVFVGIQPS RSRGENDYAS YHDADLVPPH AYLAFYFWLR
DAFGIDAVIH LGKHGNLEWL PGKSVALSDA CWPDLTLGPL PHLYPFIVND PGEGSQAKRR
AQAVIIDHLM PPLTRAENYG PLQDLERQVD EYYEALMVDA RRAKLLRKTI LATIAEHRLH
DELSVSPPRD AGDEDALLTR VDAWLCELKE AQIRDGLHVF GASPIDRQRR DTLLALARFP
VGDGKGERAG LIAALARDLA LGDDFDPLAA DWAAPWTGSR PAVLQALDAS PWRHAGDTRE
RLERLAQRWL DGLCRANVGG DAGIEATPPG AWTHTLAVLE RVRATLLPAL DACGGEELRQ
LLRGLDGRFV PPGPSGSPSR GRPDVLPTGR NFYSVDTRAV PTQAAWSLGL KSAQQLIERH
LQDHGDYPRA IGLSVWGTAT MRTGGDDIAQ AFALLGVRPK WAHGSHRVTD FEILPIEIFD
RPRIDVTLRV SGFFRDAFPN LMHLFDAAVQ AVAALDEPEA LNPIRARIER ERATWIERGV
APDEARRRAG WRVFGARPGS YGAGLQDMID QRRWQTDADL ADAYRQWGGH AYAQNSAGDA
APDVFGERLA TIDVVVQNQD SREHDILDSN DYYQFQGGMT AAVRHLSGQQ PSIYHGDHAN
PVAPKMRTLR EEIARVIRSR VVNPKWLDGV KRHGYKGAAE MAATVDYLYG YDATARVLSD
HQYALVADAY LFDDDTRAFL ERHNPKALHG ICERFVEAMQ RGLWQQPGDY RERIEAVWLD
SEQLQEGGRR
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