Gene BamMC406_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1565 
Symbol 
ID6177164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1756761 
End bp1757027 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content65% 
IMG OID641681326 
ProductSpoVT/AbrB domain-containing protein 
Protein accessionYP_001808268 
Protein GI172060616 
COG category[S] Function unknown 
COG ID[COG4456] Virulence-associated protein and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.283133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.296294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCG TTTCCATTTT CAAGAACGCC CGTAACCAGG CGATCCGCAT CCCGAAGGAC 
ATGGAGTTCG AGGGTGTGAC GGAACTCGAG ATCCGCCGCG AGGGCGACAC GTTGCTGCTG
CGTCCGGTGC GGCCGACGTG GCTGTCGTTC GCGAGTGAAC CACACGCCGA TGCCGACTTC
CTCGTCGAGC GCCCGGCGGT TGTCGAACCT GGTCGTTTCG ACCTGCCCGG CGCCGATGAC
GATGCACGGA CGGAGTCGGA CCGGTGA
 
Protein sequence
MRTVSIFKNA RNQAIRIPKD MEFEGVTELE IRREGDTLLL RPVRPTWLSF ASEPHADADF 
LVERPAVVEP GRFDLPGADD DARTESDR