| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1562 |
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| Symbol | |
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| ID | 6177388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1752278 |
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| End bp | 1754539 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681323 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001808265 |
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| Protein GI | 172060613 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000416689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.182143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTGGG CAACAGGCAC GCGTTTGCGT GCGATCGCGG CCGCGGCGAG CGTGACGTTC
GGGATGGCGG CAGGGCACGC ATTCGCGCAG ACGGCCCCGG CCGTGAACGC GGGTGCGGCG
GCGTCGGCCG ACAGTGCGCG CAACGGTACG GCGGCTGGGT CGACCGGTTC GTCGACCAGC
ACGCCGAACG GCCCGGCGAC CGGCACGCTG CCGGCGATCA ACGTCAACGC GGGCTCGGAA
GGCGACGGCA CGGTCGGTCT CGTCGCGAAG CGCAGCAGGA CCGGCACCAA GACCGATACG
TCGATCAATG AAATCCCGCA GACGATCAAC GTCGTCACCG CGCAGCAGAT CGAGATGACC
GGCGCGACCG ACGTGAACGC GGCGCTGCGC TACGTGCCGG GCTTCTCGTC GTACGGCTCG
GACAACCGCT CCGACTGGTA CGCGGCGCTG CGCGGCTTCA CGCCGACGGC CTACGTGAAC
GGCCTGCAGG TGCCGAACAC GCTGAACCTG TCGAGCTGGC GCGTCGATCC GTACATGATC
GACAGCATTA CCGTGCTGCG CGGGCCGACG TCGGTGCTGT ACGGTGCGGG CGACCCCGGC
GCGATCATCG ACGTGCAGAC CAAGACGGCC GACGGCGAGC GCGTGCGCGA AGCCGGCGTG
CAGTTCGGCA ACTATGCGCG CAAGCAGTTC ATGATCGACG TCGGCGACAA GCTAGACGCG
GACGGCAAGT ATGCGTACCG GTTCGTCGGC GTCGCGCGCG ACGGCAACGC GCTGACGGGC
CCGAACAACG ACCAGCGCGT CGCGCTCGCA CCGACGTTCC GCTGGCGCCC CGACGCCGAT
ACGTCGCTGA CGCTGTCGGC CACCTACCTG CAGGACTGGG GCGACATCTC GTCGAACTTC
CTGCCTGCCC AAGGCACGGT GCTGCCGAAC CCGAACGGGC AGATCGACAA GGACGTCTAC
GGCGGCGACC CGAATTTCAA CTACTACCGC AAGAAGCAGT GGTCGCTCGG CTATCAGTTC
GAGCGCAACC TGAACTCGAT GTGGACGTTC CGGCAGAACG TGCGCTGGAT GCACCTGTCG
CTCGACAACG GTTCGGTGTT CGGCGCGGGC TTGGCGGACG GCAGCCTGAC CGACATCAAC
CGCTGGGCCG GCGTGTTCCA GACGAACTAC AGCCGCTTCG ACATCGACAA CAACCTGCAG
GGCCGCTTCG GCACCGGGCC GCTCGAGCAC ACGCTGCTGC TCGGCTTCCA GTACAACCGG
CAGACCGCGA CCGACAGCGA ATGGCTGGCC GCCGCGCCGA CGCTGAACAT CTACAACCCG
GTCTACACGC CGGTCACGCT GTCCGTGTTC TCGCCGCCGA ACACCACGTA CCGTACCAAC
ACGTACACGA CGATGAACAC GTTCGGGCTG TACGTGCAGG ACCAGGTCAA GTGGAACCGC
TGGACACTGA CGCTCGGCGG CCGCGAGGAC TGGGTCAACC AGCGGCTGGA CGACCGCGAG
GGCGGCACGC AGTCGAAGGC CGACATCACG GCGTTCACCG GCCGAGTGGG CCTCACGTAC
CAAGGCGACT ACGGGCTGTC GCCGTACATC AGCTACGCGA CGTCGTTCAA CCCGGTGATC
GGCGTGAATC TGTATGGCGG CGGCCTGCCG CAGTCCACGC GCGGCAAGCA GATCGAGGCC
GGCCTGCGCT GGCAGCCGCC GGGCAAGAAC CTGATGCTGA ACGCGGCGAT CTACCAGATC
AACCAGACCA ACGTGCTCAC GCCGACGCCG CTGAATCTCG ATCCGTCCGG TACGACGTCG
ATCCAGACCG GCGAAGTGCG TTCGCGCGGC ATCGAGCTGA GCGCGACCGG CAAGCTCACG
CGGAACCTGT CGCTGATCGC GTCCTACGTG TACCAGGACG TGAAGAACGT GAAGGCCAAC
GACGCATCGC TGAACAACTG GCCGGTCGAC ATTCCGCGGC CGCGCCAGAT GGCGTCGCTG
TGGGCCGACT GGACGTGGCA CACGGGGCCG CTCACGGGCT TCGGCCTCGG CGGCGGCGTG
CGTTACCAGA GCGCGTCGGC CGGTGCGGCG GACAACTCGC TGACGGTATC GAGCTACACG
CTGTTCGACG CGGGCGTGCA CTACGACACG CGCAACTGGC GCTTTGCCGT GAACGGGACG
AACCTGTTCA ACCGCCACTA CATCAGCGGT TGCCAGTCGA CGAGCGTGTG CATTTTCGGT
ACCGACCGTA CGGTGATCGC CACCGCGAAA TACAACTGGT GA
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| Protein sequence | MEWATGTRLR AIAAAASVTF GMAAGHAFAQ TAPAVNAGAA ASADSARNGT AAGSTGSSTS
TPNGPATGTL PAINVNAGSE GDGTVGLVAK RSRTGTKTDT SINEIPQTIN VVTAQQIEMT
GATDVNAALR YVPGFSSYGS DNRSDWYAAL RGFTPTAYVN GLQVPNTLNL SSWRVDPYMI
DSITVLRGPT SVLYGAGDPG AIIDVQTKTA DGERVREAGV QFGNYARKQF MIDVGDKLDA
DGKYAYRFVG VARDGNALTG PNNDQRVALA PTFRWRPDAD TSLTLSATYL QDWGDISSNF
LPAQGTVLPN PNGQIDKDVY GGDPNFNYYR KKQWSLGYQF ERNLNSMWTF RQNVRWMHLS
LDNGSVFGAG LADGSLTDIN RWAGVFQTNY SRFDIDNNLQ GRFGTGPLEH TLLLGFQYNR
QTATDSEWLA AAPTLNIYNP VYTPVTLSVF SPPNTTYRTN TYTTMNTFGL YVQDQVKWNR
WTLTLGGRED WVNQRLDDRE GGTQSKADIT AFTGRVGLTY QGDYGLSPYI SYATSFNPVI
GVNLYGGGLP QSTRGKQIEA GLRWQPPGKN LMLNAAIYQI NQTNVLTPTP LNLDPSGTTS
IQTGEVRSRG IELSATGKLT RNLSLIASYV YQDVKNVKAN DASLNNWPVD IPRPRQMASL
WADWTWHTGP LTGFGLGGGV RYQSASAGAA DNSLTVSSYT LFDAGVHYDT RNWRFAVNGT
NLFNRHYISG CQSTSVCIFG TDRTVIATAK YNW
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