| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1557 |
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| Symbol | |
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| ID | 6176040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1733086 |
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| End bp | 1734831 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681318 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_001808260 |
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| Protein GI | 172060608 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.931443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.535209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTG CCCACGAGCC CTCTTCCCCG CCGTCCCTCG ACGCCTCCCC CGGCCGCCCC
GCGGCCCGCC TGATCCTCGC GCTGCTGCGC GAAAGCCGCG CGTCGCTCGC GCTGGCGCTC
GTCGCCTGCG TGCTCAACGG CGTCGCGAGC GTGCTGCTCG TCGCGACGCT GAACCGCGCG
CTCGCGCAGC CCGGCGCGGC CGATGCGTCG CTCGCGTGGC GCTTCGCGCT GTGCGCGGTG
ATCGCGCTCG TCACGCGGAT CGTGTCGGGC ACGCTGTTCG CCCGGCTGTC GCAGGACACG
ATGGCGCGGC TGCGCGTGCA TCTCGCGCGG CGCGTCGGCG CGGCCGAGCT GCGCGACATC
GAGCGGATCG GCGCGGCGCC CGTGCAGTCG GTGCTGACCG ACGACGCGAC CAACGTGTCG
ATGCTGTTCT TCGCGCTGCC GAACCTGGTG ATGCACGGCT CGATCGTGTT CGGCTGCCTC
GGCTATCTCG CGTGGCTGTC GTGGCCCGTG TGCGTGCTCG CGCTGACCGC GATCATCGCG
GGCTCGCTCG GCTATCACAC CGGCGATCGC CGCGCGATCG CGTCGCTCGA AGCGGCCGGC
CAGGCGCAGG ACCGCCTGTT CGGCTATCTC GGCTCGCTGT TCTCCGGCGC GAAGGAACTG
AAGCTGCACG ACGCGCGCGC ACGCCAGTTC GTCGACGGCC AGCTCGGCGC CGCGATCGGC
GAGGTGCGCG ACCACCGCCG CCGCGCGTTC AGCGCGTATG CGGTCGGCGT GGGCTGGATC
ATCTTCCTGT TCTACGTGTT CCTCGGCGCG GCCGCGTTCT GGCCGCAGCT GGGCGTGCAT
GCCGATGCCG GTACGGCGGC CGGCTACGTC GTCGTGTTCC TGTTCATGCT GGTGCCGCTC
GACGGGCTGC TGAACAACCT GCCGACCGTC AACGCGGCGC GCGTGTCGCT CGGGCGCATC
GAAGGCGTGA TGGCCGAGTT CGGCGCGCTG CGCACGGTGC CGCCGGCCAG CGACGCGCCC
GACGTGCCGC CGGCCGGCGC CGTCACGCTG CGCGGCGTCA CGCATGCGTA CTTCCACGAG
CGCGACGAGC GGATGTTCCG CATCGGGCCG ATCGACCTGA CGATCCGGCC GGGTGAGCTC
GTGTTCATCG TCGGCGGCAA CGGCAGCGGC AAGACGACGC TCGCGAAGGT GCTGACCGGG
CTCTACGAGC CGGAGGAAGG CACGATCGAG GTCGACGGCC GCACGATCGG CTGGCGCGAG
CGCGCCGCGT ACCGGCAGCG CTTCAGCGCG GTGTTCAACG ACTTCCACCT GTTCGATGCG
CTGCTCGGCA TCGTCGATCC GGACGATCCC GCCCGCACGC AGGCCGATGC GCGCGCGAAC
GCGCTGGTCG CGAAGCTCGC GCTCGATCAC AAGGTGAAGG TCGTCGACGG CGCGTTCTCG
AACCGTGCGC TGTCGACCGG GCAGCGCAAG CGGCTCGCGC TCGTCGTCGC GTATCTGGAA
GACCGCCCGT TCTACCTGTT CGACGAATGG GCGGCCGACC AGGATCCGTC GTTCAAGGCC
GTGTTCTACG AGCAGCTGCT GCCCGAGCTG CGCGCACGCG GCAAGGCCGT GATCGTGATC
ACGCACGACG ACCGCTATTT CGATCTCGCC GATCGGCTGC TGAAGCTCGA CAACGGTCAG
ATCGTCAGCG ACACGACGCC CGCGCGTTCA CGCGCACCAG CGGGTGTCGA TGCGCTGAGT
GCGTAA
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| Protein sequence | MTAAHEPSSP PSLDASPGRP AARLILALLR ESRASLALAL VACVLNGVAS VLLVATLNRA
LAQPGAADAS LAWRFALCAV IALVTRIVSG TLFARLSQDT MARLRVHLAR RVGAAELRDI
ERIGAAPVQS VLTDDATNVS MLFFALPNLV MHGSIVFGCL GYLAWLSWPV CVLALTAIIA
GSLGYHTGDR RAIASLEAAG QAQDRLFGYL GSLFSGAKEL KLHDARARQF VDGQLGAAIG
EVRDHRRRAF SAYAVGVGWI IFLFYVFLGA AAFWPQLGVH ADAGTAAGYV VVFLFMLVPL
DGLLNNLPTV NAARVSLGRI EGVMAEFGAL RTVPPASDAP DVPPAGAVTL RGVTHAYFHE
RDERMFRIGP IDLTIRPGEL VFIVGGNGSG KTTLAKVLTG LYEPEEGTIE VDGRTIGWRE
RAAYRQRFSA VFNDFHLFDA LLGIVDPDDP ARTQADARAN ALVAKLALDH KVKVVDGAFS
NRALSTGQRK RLALVVAYLE DRPFYLFDEW AADQDPSFKA VFYEQLLPEL RARGKAVIVI
THDDRYFDLA DRLLKLDNGQ IVSDTTPARS RAPAGVDALS A
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