Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1554 |
Symbol | |
ID | 6176796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1728942 |
End bp | 1731035 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641681315 |
Product | iron-hydroxamate transporter permease subunit |
Protein accession | YP_001808257 |
Protein GI | 172060605 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.554327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.61391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGG TCGCGGGGCG CCAGCGGCTC GCGGCGAGCG GGCAGCGCAC GGTATCCGGC CGCCGCGCCG GTGCGATCGC GCTCGGCCTC GTCGTGCTGA TCGCCGTGCT GGCGGTGTTG CGCGTCGCGC CGGACCTGCG CGTGTGGTGG AACGCCGTGC CGGGCAGCGA CGCCGCCGCG CTCGCGGGCG TGTTCCTGTT CGATCTCAAC CTGCCGCGCG TCGCGGCCGC GCTCGTCGCG GGCGGCTGTC TCGGCATCGC GGGCGCGCTG TTCCAGTCGC TCACGCGCAA CCCGCTCGCG TCGCCAGACC TGCTCGGCGT GACGGGCGGC GCGCAGCTCG GCCTGCTCGC GGCGATGCTG GTGCCGGCGC TCGCCGGTGT CGCATCGGTG CCGCTGCTGT TCGTCTGCGG GCTGATCGCC GCCGCGTGCG CGATCGTCGC GGCCGGCGGC TGGCGCGCGA CGCCGCTGCG GCTCGTGCTT GCGGGCAGCG TCTGCATGCT GCTGTTCGCG GCGCTGTCGA CGCTCGTGCT CGCGTTCTTC GAGCAGAACA TCGCAGGCGC CGCGCTGTGG ACCAACGGCA GTCTTTATCA ACCGGGCGCG ACCGGGCTCG CGCTCGCCGC GCGCTGGCTC GTCGTGCCGC TCGTCGCGCT GCCGTTCGTG ATCCGGCCGC TGAACCCGCT CGCGCTCGGC GACGAGGCGG CGGCCGCGGC CGGCGTGCGC GTCGATGCGA CGCGACTCGC CGCGACGATC GTCGCGGTCG CGTTCACGAG CGTCGCGGTC AGCATCGCGG GCCCGCTGTC GTATGTCGGG CTCGTCGCGC CGAACCTGCT GCGCCAGGTG CGCGGGGCCC GCGCGGCGCG GCTCGGCGTA CTGGTGCCGC TGTCGGCGCT CGCGGGCGGT GCGCTCGTGC TGGTCACCGA CAGCGCGGTG CTCGCGTCGG GCCTCGACGC GACGCTGTCG ACGGGTGTCG CGATCGCGCT CGTCGGCACG CCGCTGATGC TCGCGATGAT CCGGCGCGGC GCCGCGTGGT CGGGCGTGCT GCATGCGCAA GCCGAACGCG CGGCCGGCAG CGGCTCGACG CGCGTGGTCG GCTGGCTCGA AGGGCTCGGC TGGCCGCTGC GCACCGTGCT GTTCGTCGCG GCCGGCGTGC TCGCGGTGTT CGTCGGCGTG TCGGCCGGCC CCGAATGGCT GTCGCCCGCG CGCTGGCTGG CCGCGCTGTC GGGCCACGAT GCGCTCGCGC GGATGCTGAT CGACCTGCGC ATGCCGCGGC TGCTGTGCGC GCTCCTCGCG GGCGCGCTGC TGGCCGTGAG CGGCGTCGCG ATGCAGAGCG TCGTGCGCAA CCCGCTCGCC GGCCCCGAAG TGCTCGGCGT CACGCAGGGC GCGGGGCTCG TCACGCTGTT CGCGTTGTCG ACGTGGCCGC TGATGGGCCA CGTGACGCTC GCCGCGGCCG CGTTGACCGG CGGTGCGCTG TCGCTCGCGA TCACGCTCGC GCTGAATCAT CGGCATCGTT ACGCACCGCT CGCGGTCGCG CTGACCGGTA TCGCGATCGG CGCGCTGTGG ACCACGCTCG CGCAATGGCT GATCACGCAG GAAAGCGTGC AGCCCGCGCG CTTCGTCGTC TGGCTCGTCG GCGGCACCTA CGGCCGCAGT TGGGGCGAAG TGTCGATGCT GCTGCCGTGG TGCGTGCTCG CGATTCCTGT ATTTGCGTGG CTCGCGCGGC CGCTCGACAT GCTCGCGCTC GGCGACGACC AGGCGGCCGC GCTCGGCCTG CCGGTCGCCG CGTTGCGGCC GCTCGCGCTG ACGATCGCGA CGCTCGCGGC TTGCGCGGCC GTCGCGGCGG TCGGGCCGGT CGGCTTCATC GGACTGATGG CGCCGCACGT CGCGACGATG CTCGGCGCAC GCCGGCATCG CACGCGGCTG TGGCTCGCGG CCGCTTGCGG CGCGCTGATC CTCGGCCTCG CCGATCTGGC GGCGCGCACG GTCGTCGCGC CGCGCGAAGT GCCGGCCGGC GTGCTGACCG CGCTGATCGG CGCGCCGTAC CTGCTCGGGC TGCTGATCGT CGAGGGGCGC CGCGCCCGGC GTACGGGGCG ATGA
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Protein sequence | MTTVAGRQRL AASGQRTVSG RRAGAIALGL VVLIAVLAVL RVAPDLRVWW NAVPGSDAAA LAGVFLFDLN LPRVAAALVA GGCLGIAGAL FQSLTRNPLA SPDLLGVTGG AQLGLLAAML VPALAGVASV PLLFVCGLIA AACAIVAAGG WRATPLRLVL AGSVCMLLFA ALSTLVLAFF EQNIAGAALW TNGSLYQPGA TGLALAARWL VVPLVALPFV IRPLNPLALG DEAAAAAGVR VDATRLAATI VAVAFTSVAV SIAGPLSYVG LVAPNLLRQV RGARAARLGV LVPLSALAGG ALVLVTDSAV LASGLDATLS TGVAIALVGT PLMLAMIRRG AAWSGVLHAQ AERAAGSGST RVVGWLEGLG WPLRTVLFVA AGVLAVFVGV SAGPEWLSPA RWLAALSGHD ALARMLIDLR MPRLLCALLA GALLAVSGVA MQSVVRNPLA GPEVLGVTQG AGLVTLFALS TWPLMGHVTL AAAALTGGAL SLAITLALNH RHRYAPLAVA LTGIAIGALW TTLAQWLITQ ESVQPARFVV WLVGGTYGRS WGEVSMLLPW CVLAIPVFAW LARPLDMLAL GDDQAAALGL PVAALRPLAL TIATLAACAA VAAVGPVGFI GLMAPHVATM LGARRHRTRL WLAAACGALI LGLADLAART VVAPREVPAG VLTALIGAPY LLGLLIVEGR RARRTGR
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