| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1545 |
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| Symbol | |
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| ID | 6176192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1718445 |
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| End bp | 1719902 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641681306 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001808248 |
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| Protein GI | 172060596 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.355658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCAT TGAATGCATG GGCCGCACCG AGGCTTCAGC TCGCGTTGGC CGCGGCGCTC
GCGCTCGCGG GCTGCTCGCT CGCGCCGCGT TACGAGCGGC CGGCGGCGCC GGTGCCGGCC
AGCTATGCGA CGGTCGATGG CGACACGCAG CAGGGTGCCG GGCCGGCTTC GACGGCCGAC
GCCGCGCTGC TCGACGACTG GCGCGCGTAT TTCACCGATC CGGCGCTGCA GGCGTGGATC
GATGCGGCGC TCGCCAACAA TCGCGACCTG CGGATCGCGG CCGGCCGGCT CGACGAAGCG
CGCGCGCTGT ACGGCGTGCA GCGCGCGGAC CTGATGCCGT CGGTCGACGC GAATCTCGGC
TACGAACGCA CGCGCCAGTA CGACCCGGTC GTGCGCGAGA GCGCGGTGAG CGGGCTGTAT
CGCGCGGGCG TCGGCGTCAG TGCGTACGAG CTCGACCTGT TCGGCCGCGT GCGCAACCTG
TCCGATGCGG CGCTCGCCGA GTATTTCGCG ACGGCCGACG CGCAGCGCAC GGTGCGCATC
GGCGTGATTG CCGAAGTCGC GGGGGCGTAC GTGTCGGAGC GATCGTTGCG CGAGCAACTG
GCGCTGGCCC AGCGCACGCT CGACGCGCGC GAGCGCATCG CCGCGCTCAC GCAGCGCCGC
TACGCGGCCG GCACGAGCGA CGCGATCGAA CTGCGCTCGG CCGAGATGCT GGTCGCGTCC
GCGCGCGCAT CGCAGGCCGC GCTGCAGCGC GAGCATGCGC AATCGGTGCG CGCGCTGCAA
TTGCTCGCCG GCGATTTCGC GCGCAGCGTG CCCGCCGATG GCACCGCGCT CGACACGCTC
GCGATCGCGC CGGTGGCGCC CGGCGCGCCG AGCGCGCTGC TGGAGCGGCG GCCCGACATC
CGGCAGGCCG AGTCGCGGCT CAAGGCCGCG AACGCGCAGA TCGGCGCGGC GCGCGCGGCA
TTCTTCCCGC GCGTCGCGCT GACCACCGAC TACGGCTCGG TCAGCGATGC GTTCTCGAGC
CTGTTCGCGG CCGGAACGAG CGTGTGGACG TTCGCGCCGC GCATCACGCT GCCGATTTTC
GCGGGCGGTC GCAATCGCGC GAATCTCGAC GTCGCGAATG CGCGCAAGCA CATCGCGGTC
GCCGAGTACG AGAAGACCGT GCAGACCGCG TTCCGCGAAG TGGCCGATGC GTTCGCCGCG
CGCGACTGGA TCGATCGCCA GCTCGCCGCG CAGCAGGACG TCTACGCGGC CGACGGCGCG
CGGCTGAAAC TCGCGGAGCG CCGGTATGCG GGCGGCGTCG CGACGTATCT CGAACTGCTC
GACGCGCAGC GCAGCACGTA CGAGTCCGGG CATGAGCTGA TCCGGCTCAA GGCGCTGCGG
CTCGCGAATG CGATCGCGCT GTATCGCGCG CTCGGCGGCG GCTGGGCGCC GGCCACCGCT
GGCGAAGCCG CCGCGTGA
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| Protein sequence | MFALNAWAAP RLQLALAAAL ALAGCSLAPR YERPAAPVPA SYATVDGDTQ QGAGPASTAD
AALLDDWRAY FTDPALQAWI DAALANNRDL RIAAGRLDEA RALYGVQRAD LMPSVDANLG
YERTRQYDPV VRESAVSGLY RAGVGVSAYE LDLFGRVRNL SDAALAEYFA TADAQRTVRI
GVIAEVAGAY VSERSLREQL ALAQRTLDAR ERIAALTQRR YAAGTSDAIE LRSAEMLVAS
ARASQAALQR EHAQSVRALQ LLAGDFARSV PADGTALDTL AIAPVAPGAP SALLERRPDI
RQAESRLKAA NAQIGAARAA FFPRVALTTD YGSVSDAFSS LFAAGTSVWT FAPRITLPIF
AGGRNRANLD VANARKHIAV AEYEKTVQTA FREVADAFAA RDWIDRQLAA QQDVYAADGA
RLKLAERRYA GGVATYLELL DAQRSTYESG HELIRLKALR LANAIALYRA LGGGWAPATA
GEAAA
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