Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1541 |
Symbol | |
ID | 6176355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1711695 |
End bp | 1712972 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641681302 |
Product | peptidase M23 |
Protein accession | YP_001808244 |
Protein GI | 172060592 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.759696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGACAC TTTTGGTCAA GCCTGCCGCA ATTCCTGATG CTTTCGCGCC CGGGCGCGCG CAGCGCCTCG TGCGCGCGCT CGTGCCGGCC GCCGTGCTCG GCGCCCTCGC CGCCTTCGGT CTCGCCGCCG CGCTGCCCGC CGTCTCGCAA CTGCCGGGCG CCGTCGATTC GGGCACGGCC GCGCTGCCGC AGCGCGTGCT GTCCGACACG CCGTTTCCGA CCGCGCAGCA TTTCGTGACG AGTGAGCTCG CGCGCACGCT GGGCGAGCGC AGCGAACTCG ACGAACACGG CGACCGCAGC CCGCAGCCGG GCCTGTTCGC GCCGCTCAGC GCGCACCGCA ACGACATGCT CGGCTATGCG AGCCTGTTCC AGTTCGCGGC GCCCGAAACC CAGCACGGGA CGCGCGCCGG CGACATCGAG CTCACGCTGT CCGATACGCT GAACCGTCTC GACGTGCCGC CCGAGGTGCG CATCCAGCTC GGCGATCTCG TCACCGGCAA GGTCGCGATG CGCGCCAGCG CGCAGCGCGG CGACTACTAC CGCATCGCGT ATGACACGAA CAACGGCACG CCGCACCTCA CCGCGCTCGA GCTGCGCGTC GCGGGCCGCA CGTTCGGTGC GATCTGGTTC CGCGCACCGG GCGCCGACCA CGGCGCGTAC TACACGCTCG ACGGCGCGCC GCTCGAGGCG GCCGCGTTCA CGATGCCCGT CAAGTGGACG CGCATCAGCT CGTTCTTCGG CGAACGCGTG CACCCGCTGT CGCAGGCGAT GGCGTTCCAT ACGGGCGTCG ATCTCGCCGC GCCGTCCGGC ACGCCCGTCA ACGCGGCGGC CGATGGCGTC GTGTCGTTCG TCGGCACCGA TGCGGACGGT TACGGCCGCT ACGTGATCGT CGATCACGCG GACGGCTATT CGACCTACTA CGCCCATCTG TCCGCATATG CGCGCGGGCT GAAGACGGGC GAAACCGTGA AGCAAGGCCA GCGCATCGGC TCGGTCGGCA TGACCGGCGC GGCCACCGGC CCGCACCTGC ACTTCGAGGT GCGCGTCGCG AACGATCCGG TCGATCCGCT CGTCGCGCTC GCGAACGCGC AGACGGGGCT GTCCGACATG CAGCGCACCG CGTTCCGTCA GGAAGCCGCG CAATGGCGCT TCCGCCTCGC GTCGATCAAG ACTTCGCCGT TCGCGTTCGC GCAAAACGAC GGCCCGCTGT GGGGCGACTT CGCGACCGAC TCGTCGACGC TGCGCGCGGT CTTCAACACG CACTATTCGG CGTCGTGA
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Protein sequence | MWTLLVKPAA IPDAFAPGRA QRLVRALVPA AVLGALAAFG LAAALPAVSQ LPGAVDSGTA ALPQRVLSDT PFPTAQHFVT SELARTLGER SELDEHGDRS PQPGLFAPLS AHRNDMLGYA SLFQFAAPET QHGTRAGDIE LTLSDTLNRL DVPPEVRIQL GDLVTGKVAM RASAQRGDYY RIAYDTNNGT PHLTALELRV AGRTFGAIWF RAPGADHGAY YTLDGAPLEA AAFTMPVKWT RISSFFGERV HPLSQAMAFH TGVDLAAPSG TPVNAAADGV VSFVGTDADG YGRYVIVDHA DGYSTYYAHL SAYARGLKTG ETVKQGQRIG SVGMTGAATG PHLHFEVRVA NDPVDPLVAL ANAQTGLSDM QRTAFRQEAA QWRFRLASIK TSPFAFAQND GPLWGDFATD SSTLRAVFNT HYSAS
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