| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1540 |
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| Symbol | |
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| ID | 6177583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1710804 |
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| End bp | 1711529 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681301 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001808243 |
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| Protein GI | 172060591 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.389226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTT CGCTGCTGCT CGCCAACCTG CCGTATCTGC TCGTCGGCGC GTTCCCGGAA
GGCCCGCTCG GCGGCGCCGC GCTGTCGCTG GTGCTTGCGA TCGCGTCGGC CGTTGCGTCG
GCGGGGTTGG GGGTGGCGCT CGGCGTCGCG ATGGCGCTTG CGCGTGGCCC CGTGCGCGTG
CTGCTGCTCG CGTTCATCGG CTTCTTCCGC GCGATTCCCG TGCTGATGCT GATCTTCTGG
ACGTACTTCC TGATGCCCGT GCTGCTGCAC ATGGATGTGC CGGGGCTCGC GACGGTCGTC
TGCGCGCTCG CGCTCGTCGG CGGCGCGTAT CTCGCGCATG CGGTGCACGC GGGCATCGTC
GCCGCCGGTG ACGGGCAATG GCAGGCCGGG CTGTCGCTCG GGCTCACGCG CTGGCAGACG
GTACGCCATG TGCTGCTGCC GCAGGCGATC AGGATCATGA CGCCGTCATT CGTCAACCAA
TGGGTCGCGC TCGTGAAGGA CACGTCGCTC GCGTATATCG TCGGCGTGCC GGAACTTTCG
TTCGTCGCGA CGCAGGTGAA CAACCGGCTG ATGGTGTATC CGGCGCCGAT CTTCCTGTTC
GTCGCGGCGA TCTATCTGGT GCTGTGCACG TCGCTCGACG GCGCGGCACG CTGGCTGTTG
TCGCGCGGCT TGCGTGCGGA GCGCGTCGAG CGGGCGACGA CCGGACGCAC GGAGCCCGCG
CGGTGA
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| Protein sequence | MDFSLLLANL PYLLVGAFPE GPLGGAALSL VLAIASAVAS AGLGVALGVA MALARGPVRV
LLLAFIGFFR AIPVLMLIFW TYFLMPVLLH MDVPGLATVV CALALVGGAY LAHAVHAGIV
AAGDGQWQAG LSLGLTRWQT VRHVLLPQAI RIMTPSFVNQ WVALVKDTSL AYIVGVPELS
FVATQVNNRL MVYPAPIFLF VAAIYLVLCT SLDGAARWLL SRGLRAERVE RATTGRTEPA
R
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