| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1539 |
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| Symbol | |
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| ID | 6177662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1710079 |
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| End bp | 1710801 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681300 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001808242 |
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| Protein GI | 172060590 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.441453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.87599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGGT TGGCTCCCAA ATATCTGTCC TGGCTCTGGC AGGGTTTCCT GCTGACACTC
GGCCTCGCGG CCGCGTCGGC GGTCGCCGCG ACCGCCGGCG GGCTGCTGCT CGCGGTCATG
CGGCATGCGC GCGGCAGGGT GCTGCGCACG GCGGCCGCCG CATACGTCGT CGCGTTCCGC
AACACGCCGC TGCTCGTGCA GTTGCTGTTC TGGTATTTCG GCGTCGCGTC GTTGCTGCCC
GACACGTGGA TCGCGTGGCT GAACGCGCGC CATGAAGTGA GCGCGGGCCC GCTCACGCTC
GCATGGCCAT CGTTCGAATT CGTCGCGGGC TGGGTCGGGC TGAGCGCATA CACGGCCGCG
TTCGTCGCCG AGGAGTGCGA AGCCGGCCTG CGCGGCGTGC GCCGCGCGCA GCATGACGCG
GCAGCCGCGC TCGGCCTCAC GCCGATGCAG TCGCTGCGCT ACGTGGTATT GCCGCAGGCC
GTGCGCATCG CGCTGCCGCC GCTGTTCGGC CAATACATGA ATCTCGTGAA GAACTCGTCG
CTCGCGATGG CGATCGGCGT GGCCGAGCTG TCGTATGCGT CGCGGCAGGT CGAAACGGAA
ACGTTCAAGA CCTTCGCCGC GTTTGGCGTC GCGACCGTGC TCTACGTCGC TGCAGTGGCC
GCGATCGAGG CCGGTGCGTA CGCGGCCACG CAATGGCGCG ACCGGCTCGG GGCGGGGCGT
TGA
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| Protein sequence | MLGLAPKYLS WLWQGFLLTL GLAAASAVAA TAGGLLLAVM RHARGRVLRT AAAAYVVAFR
NTPLLVQLLF WYFGVASLLP DTWIAWLNAR HEVSAGPLTL AWPSFEFVAG WVGLSAYTAA
FVAEECEAGL RGVRRAQHDA AAALGLTPMQ SLRYVVLPQA VRIALPPLFG QYMNLVKNSS
LAMAIGVAEL SYASRQVETE TFKTFAAFGV ATVLYVAAVA AIEAGAYAAT QWRDRLGAGR
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