| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1532 |
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| Symbol | |
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| ID | 6177728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1699644 |
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| End bp | 1700228 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641681293 |
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| Product | fimbrial protein |
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| Protein accession | YP_001808235 |
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| Protein GI | 172060583 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.690066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGA ATCTGCTTCG GAGTTGCGTT GCAGCGGGTA TCGCGAGTGT CGCACTGGTG
CCGTCGGTTT CCCACGCATT CGACGGCCAG CTCGATTTCT ACGGCAGCAT CTCCGACGTC
ACCTGCAACA TCAATGGCCA GGCGCCCGGC GCCGGCAACC GGAAGGAGGT GCAGCTCGGC
GATCGCATCA GCCCGAGCAC CTTCAACAAG ATCGGTGCGA CGTCGACGCC CGTCCCGTTC
AGCCTGGCTA TCGGCGGCAA TACGGGCTGC ACCAACGGTA CGAAGGTCGT GATCGAATTC
GATCCGGTGT CGGTCAACAT CAATCCGGCG ACCGGCAACC TGAAGCTCAT CGGCACCAAG
CCGGCGGAAG GCGTCGAGAT CCAGATCAGC GACGCGGGTA ACGGAAAGGC AGGCAAGATC
ATGCTCGGCA AGCCGCAGGA CATCGGGGAC GCGCAGATCG CGCTCGTCGA GAACAACGTC
GCAACGCTGA CCTATGCGGC GTCGTACGTA TCGACGGCTG CGCCGGATGC AATCAAGACC
GGTTCGGGCA ACTCGTTCAT CCGCTATATG CTTGCTTACC ACTGA
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| Protein sequence | MKMNLLRSCV AAGIASVALV PSVSHAFDGQ LDFYGSISDV TCNINGQAPG AGNRKEVQLG
DRISPSTFNK IGATSTPVPF SLAIGGNTGC TNGTKVVIEF DPVSVNINPA TGNLKLIGTK
PAEGVEIQIS DAGNGKAGKI MLGKPQDIGD AQIALVENNV ATLTYAASYV STAAPDAIKT
GSGNSFIRYM LAYH
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